RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PCDHGB5Q9Y5G0 923 aa24.67■■□□□ 1.54
RUNDC3A-201ENST00000225441 COCHO43405 550 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 TMCC1O94876 653 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 BMP10O95393 424 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 UROSP10746 265 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 HGFP14210 728 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATP6V1B1P15313 513 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 EPCAMP16422 314 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 CAPN3P20807 821 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATP6V1B2P21281 511 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 GK3PQ14409 553 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 TMC8Q8IU68 726 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 HOMEZQ8IX15 550 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 TNIP2Q8NFZ5 429 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 OR13C4Q8NGS5 318 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 RMND5BQ96G75 393 aaPredicted RBP24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 LRRC3Q9BY71 257 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 CLK4Q9HAZ1 481 aaKnown RBP24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 ATXN10Q9UBB4 475 aa24.66■■□□□ 1.54
RUNDC3A-201ENST00000225441 C2orf81A6NN90 581 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 ZNF839A8K0R7 811 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 SUPT3HB4E1H0 165 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 H3BMM5 538 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 FXYD1O00168 92 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 MUSKO15146 869 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 AKAP10O43572 662 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 SUPT3HO75486 399 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 NDUFS3O75489 264 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 CRCPO75575 148 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 HMBSP08397 361 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 ARSAP15289 507 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TSPAN8P19075 237 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC6A2P23975 617 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 FASP25445 335 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 EEF1DP29692 281 aaKnown RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 NME5P56597 212 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 EEFSECP57772 596 aaKnown RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 AASDHQ4L235 1098 aaPredicted RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 PDCD4Q53EL6 469 aaKnown RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TRIML2Q8N7C3 387 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 EXT2Q93063 718 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 CENPNQ96H22 339 aaPredicted RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 SLC29A1Q99808 456 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 BRINP2Q9C0B6 783 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TUBB1Q9H4B7 451 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 AGPAT4Q9NRZ5 378 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 AIG1Q9NVV5 245 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 PCDHA9Q9Y5H5 950 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 AK5Q9Y6K8 562 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TTC24A2A3L6 582 aaPredicted RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 C2orf78A6NCI8 922 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TRIM64CA6NLI5 447 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 CCL16O15467 120 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 SIX3O95343 332 aaPredicted RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 ESRRBO95718 433 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 CDH4P55283 916 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 GNA12Q03113 381 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 GRB7Q14451 532 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 VPS26BQ4G0F5 336 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TBCELQ5QJ74 424 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 NADSYN1Q6IA69 706 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 TDHQ8IZJ6 230 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 HS6ST3Q8IZP7 471 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 CD320Q9NPF0 282 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 RIC8BQ9NVN3 520 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 DUS2Q9NX74 493 aaKnown RBP24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 ZIM2Q9NZV7 527 aa24.65■■□□□ 1.54
RUNDC3A-201ENST00000225441 PER2O15055 1255 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 EEDO75530 441 aaKnown RBP24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 CYBBP04839 570 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 HOXD9P28356 352 aaPredicted RBP24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 GABRR2P28476 465 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 KCNK10P57789 538 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 RCAN2Q14206 197 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 GALNT3Q14435 633 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 XKR7Q5GH72 579 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 PAQR3Q6TCH7 311 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 AMIGO2Q86SJ2 522 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 PAPD5Q8NDF8 572 aaKnown RBP24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 TRPV3Q8NET8 790 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 SH3RF2Q8TEC5 729 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 CIB1Q99828 191 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 OLAHQ9NV23 265 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 CMTM6Q9NX76 183 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 UBA2Q9UBT2 640 aaPredicted RBP24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 CEPT1Q9Y6K0 416 aa24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 MTCL1Q9Y4B5 1905 aaKnown RBP24.64■■□□□ 1.54
RUNDC3A-201ENST00000225441 CHD5Q8TDI0 1954 aa24.64■■□□□ 1.53
RUNDC3A-201ENST00000225441 KDELR3O43731 214 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 VPS26AO75436 327 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ECI2O75521 394 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 TIPRLO75663 272 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 HOXA9P31269 272 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 TTPAP49638 278 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 ADGRD2Q7Z7M1 963 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 OR56A4Q8NGH8 313 aa24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 GFM2Q969S9 779 aaKnown RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 CINPQ9BW66 212 aaPredicted RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 LEF1Q9UJU2 399 aaPredicted RBP24.63■■□□□ 1.53
RUNDC3A-201ENST00000225441 CHD7Q9P2D1 2997 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms