RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 OLFM1Q99784 485 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 OR2AG1Q9H205 316 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 CCDC68Q9H2F9 335 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 RMI1Q9H9A7 625 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 TM9SF3Q9HD45 589 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 KLHL42Q9P2K6 505 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 GNPTGQ9UJJ9 305 aa13.85□□□□□ -0.19
SEC61B-201ENST00000223641 PCYT1BQ9Y5K3 369 aaPredicted RBP13.85□□□□□ -0.19
SEC61B-201ENST00000223641 SPTY2D1-AS1A0A0U1RR47 76 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 NIPSNAP2O75323 286 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 RHOBTB1O94844 696 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 WNT1P04628 370 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 GSTM1P09488 218 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 MYZAPP0CAP1 466 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 KELP23276 732 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 CLCN7P51798 805 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 GSTM4Q03013 218 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 TMED2Q15363 201 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
SEC61B-201ENST00000223641 PTRHD1Q6GMV3 140 aaKnown RBP13.84□□□□□ -0.19
SEC61B-201ENST00000223641 TMEM220Q6QAJ8 160 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 C11orf96Q7Z7L8 435 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 TRABD2AQ86V40 505 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 CEP97Q8IW35 865 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 OR56A4Q8NGH8 313 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 POPDC3Q9HBV1 291 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 TMEM98Q9Y2Y6 226 aa13.84□□□□□ -0.19
SEC61B-201ENST00000223641 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
SEC61B-201ENST00000223641 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.19
SEC61B-201ENST00000223641 C17orf113A0A1B0GUU1 675 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 A0A1W2PPM1 405 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 OR2AG2A6NM03 316 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 IQCF5A8MTL0 148 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 F8W8V4 182 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 RGS16O15492 202 aaPredicted RBP13.83□□□□□ -0.2
SEC61B-201ENST00000223641 OPA1O60313 960 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 ASMTLO95671 621 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.2
SEC61B-201ENST00000223641 STMN1P16949 149 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 ITPKAP23677 461 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 HTR1BP28222 390 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 SKIV2L2P42285 1042 aaKnown RBP13.83□□□□□ -0.2
SEC61B-201ENST00000223641 SERPINB8P50452 374 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 RAB10P61026 200 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 GTF2H3Q13889 308 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 PTK2BQ14289 1009 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 GBX1Q14549 363 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 USP10Q14694 798 aaKnown RBP13.83□□□□□ -0.2
SEC61B-201ENST00000223641 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 RGL4Q8IZJ4 473 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 GPATCH11Q8N954 259 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 ACMSDQ8TDX5 336 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 NAT14Q8WUY8 206 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 TLCD1Q96CP7 247 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 KLHDC7BQ96G42 594 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 PANX3Q96QZ0 392 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 FGF22Q9HCT0 170 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 AASDHPPTQ9NRN7 309 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 SNX15Q9NRS6 342 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 TAS2R13Q9NYV9 303 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 GALPQ9UBC7 116 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 PILRBQ9UKJ0 227 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 SLC39A10Q9ULF5 831 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
SEC61B-201ENST00000223641 DHRS7Q9Y394 339 aa13.83□□□□□ -0.2
SEC61B-201ENST00000223641 TP53BP1Q12888 1972 aaPredicted RBP13.82□□□□□ -0.2
SEC61B-201ENST00000223641 PRSS38A1L453 326 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 KLHL33A6NCF5 533 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 PRR19A6NJB7 356 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 TLR4O00206 839 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 TPP1O14773 563 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 VILLO15195 856 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 BCAT2O15382 392 aaPredicted RBP13.82□□□□□ -0.2
SEC61B-201ENST00000223641 GRID2O43424 1007 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 MAGEC1O60732 1142 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 VPS26AO75436 327 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 FTH1P02794 183 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 C2P06681 752 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 CHRM3P20309 590 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 AOAHP28039 575 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 CRABP2P29373 138 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 CCR7P32248 378 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 HOXD12P35452 270 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 DHPSP49366 369 aaPredicted RBP13.82□□□□□ -0.2
SEC61B-201ENST00000223641 AFF3P51826 1226 aaKnown RBP13.82□□□□□ -0.2
SEC61B-201ENST00000223641 THOP1P52888 689 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 SLC18A2Q05940 514 aa13.82□□□□□ -0.2
SEC61B-201ENST00000223641 SIM2Q14190 667 aaPredicted RBP13.82□□□□□ -0.2
SEC61B-201ENST00000223641 FZD2Q14332 565 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms