RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ANKDD1AQ495B1 522 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 FGD3Q5JSP0 725 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 C6orf136Q5SQH8 315 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 NADSYN1Q6IA69 706 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 AFTPHQ6ULP2 937 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 GLT6D1Q7Z4J2 308 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 CDYL2Q8N8U2 506 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 MDGA1Q8NFP4 955 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 PROKR1Q8TCW9 393 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 NSMCE3Q96MG7 304 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 BDH2Q9BUT1 245 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 C1QTNF3Q9BXJ4 246 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 PDFQ9HBH1 243 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
USB1-201ENST00000219281 ZIM2Q9NZV7 527 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 IFT80Q9P2H3 777 aaPredicted RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 EIF2B4Q9UI10 523 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 CASP8AP2Q9UKL3 1982 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 KLK8O60259 260 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 CD247P20963 164 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 HMOX2P30519 316 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 POLR2IP36954 125 aaKnown RBP17.08■□□□□ 0.33
USB1-201ENST00000219281 CCNYL2Q5T2Q4 361 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 NKAPQ8N5F7 415 aaKnown RBP17.08■□□□□ 0.33
USB1-201ENST00000219281 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 BPIFB1Q8TDL5 484 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 EEF1AKMT1Q8WVE0 214 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 NSMCE2Q96MF7 247 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 LRRC3Q9BY71 257 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 CD274Q9NZQ7 290 aa17.08■□□□□ 0.33
USB1-201ENST00000219281 TDRKHQ9Y2W6 561 aaKnown RBP17.08■□□□□ 0.33
USB1-201ENST00000219281 H0Y858 1186 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 OR1I1O60431 355 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 NIPSNAP2O75323 286 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 ALBP02768 609 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 ENO2P09104 434 aaPredicted RBP17.08■□□□□ 0.32
USB1-201ENST00000219281 ELK4P28324 431 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 MAPKAPK2P49137 400 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 DSC1Q08554 894 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 NOGQ13253 232 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 SELPLGQ14242 412 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 HID1Q8IV36 788 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 RIMKLAQ8IXN7 391 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 NUDT8Q8WV74 236 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 EXOC2Q96KP1 924 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 MUS81Q96NY9 551 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 PAIP1Q9H074 479 aaKnown RBP17.08■□□□□ 0.32
USB1-201ENST00000219281 TLR9Q9NR96 1032 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 RIC8BQ9NVN3 520 aa17.08■□□□□ 0.32
USB1-201ENST00000219281 FNDC3AQ9Y2H6 1198 aaKnown RBP17.08■□□□□ 0.32
USB1-201ENST00000219281 B4GAT1O43505 415 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 OAZ2O95190 189 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 HNRNPCP07910 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
USB1-201ENST00000219281 RGRP47804 291 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 HLCSP50747 726 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 MAPK10P53779 464 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 FAM189BP81408 668 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 ATP6AP1LQ52LC2 224 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 Q6ZNX1 250 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 Q6ZSR9 355 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 ZFAND4Q86XD8 727 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 GPSM1Q86YR5 675 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 OR7D4Q8NG98 312 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 OR52B6Q8NGF0 335 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 CD99L2Q8TCZ2 262 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 ISG20Q96AZ6 181 aaKnown RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 FUBP3Q96I24 572 aaKnown RBP eCLIP17.07■□□□□ 0.32
USB1-201ENST00000219281 PPM1MQ96MI6 270 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 GLT1D1Q96MS3 346 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 YTHDF1Q9BYJ9 559 aaKnown RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 NTN4Q9HB63 628 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 E2F3O00716 465 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 VPS26AO75436 327 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 TSPAN12O95859 305 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 EOMESO95936 686 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 TFPTP0C1Z6 253 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 CDH1P12830 882 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 TACR2P21452 398 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 EEF1B2P24534 225 aaKnown RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 ARL1P40616 181 aaPredicted RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 MTPNP58546 118 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 TAF10Q12962 218 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 PRKG2Q13237 762 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 LHX8Q68G74 356 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 PSAPL1Q6NUJ1 521 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 XKR5Q6UX68 686 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 ZNF554Q86TJ5 538 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 PIANPQ8IYJ0 282 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms