RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ZFP3Q96NJ6 502 aa10.36□□□□□ -0.75
VCL-201ENST00000211998 ANKHQ9HCJ1 492 aa10.36□□□□□ -0.75
VCL-201ENST00000211998 DNAJB9Q9UBS3 223 aa10.36□□□□□ -0.75
VCL-201ENST00000211998 A0A088AWK7 358 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SLC9A3R1O14745 358 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 ARF4P18085 180 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 ZNF10P21506 573 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 NOS2P35228 1153 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 TMBIM6P55061 237 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 CAMK1Q14012 370 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 BOP1Q14137 746 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 CMPK2Q5EBM0 449 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SNAP47Q5SQN1 464 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ANKRD13BQ86YJ7 626 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 OR52J3Q8NH60 311 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 USP7Q93009 1102 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 PPP1R16AQ96I34 528 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 FBXL20Q96IG2 436 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ITPAQ9BY32 194 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ST3GAL5Q9UNP4 418 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 KCNE2Q9Y6J6 123 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MST1RQ04912 1400 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 BUD23O43709 281 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 OTCP00480 354 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ITGB1P05556 798 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SERPINA4P29622 427 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ICAM3P32942 547 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MAPK8P45983 427 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MARSP56192 900 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 JPH3Q8WXH2 748 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 CD101Q93033 1021 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 FCRL4Q96PJ5 515 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 BEX2Q9BXY8 128 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 NXF3Q9H4D5 531 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 DDX4Q9NQI0 724 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 N6AMT1Q9Y5N5 214 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ANKDD1BA6NHY2 528 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 OR2AT4A6NND4 320 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 H0YGN5 161 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 DNAJA2O60884 412 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 REM1O75628 298 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SCELO95171 688 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 OR6A2O95222 327 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 APOC1P02654 83 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SLC6A2P23975 617 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 STOMP27105 288 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 GTF2E2P29084 291 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 WEE1P30291 646 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MNDAP41218 407 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 CYP2A13Q16696 494 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 CELF3Q5SZQ8 465 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 IDNKQ5T6J7 187 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 USP45Q70EL2 814 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 DENND6BQ8NEG7 585 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 OR5K1Q8NHB7 308 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 WNT8BQ93098 351 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 C18orf25Q96B23 403 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 CDCA5Q96FF9 252 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SLC30A2Q9BRI3 323 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 SUCOQ9UBS9 1254 aaKnown RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 EBF1Q9UH73 591 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 TNFSF13BQ9Y275 285 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MAN2B2Q9Y2E5 1009 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 L7N2F9 121 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MPZL2O60487 215 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ABCB7O75027 752 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 CYP11A1P05108 521 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 ACOX1Q15067 660 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 TLR1Q15399 786 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 PPP2R2DQ66LE6 453 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.35□□□□□ -0.75
VCL-201ENST00000211998 MARVELD2Q8N4S9 558 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 MIR1-1HGQ9H1L0 117 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 TBC1D17Q9HA65 648 aa10.35□□□□□ -0.75
VCL-201ENST00000211998 EML1O00423 815 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 XPNPEP2O43895 674 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 FGRP09769 529 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 PTPRAP18433 802 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 DGKAP23743 735 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 SLC6A4P31645 630 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 MAN2A2P49641 1150 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNF81P51508 661 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 IKBKEQ14164 716 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 C1orf189Q5VU69 101 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 MAP1SQ66K74 1059 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNF433Q8N7K0 673 aaPredicted RBP10.34□□□□□ -0.75
VCL-201ENST00000211998 TRPV3Q8NET8 790 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 CSGALNACT1Q8TDX6 532 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 SENP8Q96LD8 212 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 QRFPRQ96P65 431 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 ZNF670Q9BS34 389 aa10.34□□□□□ -0.75
VCL-201ENST00000211998 TKTL2Q9H0I9 626 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms