RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SNAP91O60641 907 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 RYKP34925 604 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 MAPKAPK2P49137 400 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 EIF2B2P49770 351 aaKnown RBP18.67■□□□□ 0.58
MBD3-201ENST00000156825 NDST2P52849 883 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 NAA20P61599 178 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 BRSK1Q8TDC3 778 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 PTCD2Q8WV60 388 aaKnown RBP18.67■□□□□ 0.58
MBD3-201ENST00000156825 MIOSQ9NXC5 875 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 SEC14L3Q9UDX4 400 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 RICTORQ6R327 1708 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 A0A0G2JN53 185 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 FPGTO14772 594 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 SLC25A12O75746 678 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 ALPIP09923 528 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 DPYSL2Q16555 572 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 B3GNT6Q6ZMB0 384 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 MCM8Q9UJA3 840 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 CORO2BQ9UQ03 480 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 C3P01024 1663 aa18.67■□□□□ 0.58
MBD3-201ENST00000156825 CCDC162PA2VCL2 907 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ELP6Q0PNE2 266 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ZCCHC10Q8TBK6 192 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 SHISA4Q96DD7 197 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 EBF4Q9BQW3 602 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 TPK1Q9H3S4 243 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 KELP23276 732 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ITGA1P56199 1179 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 GAD2Q05329 585 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 LIPEQ05469 1076 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ACAP2Q15057 778 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 SH3RF2Q8TEC5 729 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 PLEKHG4BQ96PX9 1271 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 CDK15Q96Q40 435 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 MTERF1Q99551 399 aaKnown RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 FBXW2Q9UKT8 454 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 TOP3BO95985 862 aaKnown RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 HLA-DQB2P05538 268 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 OGDHQ02218 1023 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 TIMM50Q3ZCQ8 353 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 MINDY4Q4G0A6 757 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 FBXL22Q6P050 247 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ELL3Q9HB65 397 aaPredicted RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 STX11O75558 287 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 SEC24AO95486 1093 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 MTHFRP42898 656 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ERVK-21P61565 698 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 RAPSNQ13702 412 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ZBTB6Q15916 424 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 TMEM198Q66K66 360 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 PTCHD4Q6ZW05 846 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 GALNT13Q8IUC8 556 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 S100A13Q99584 98 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 HOPXQ9BPY8 73 aaPredicted RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 ZNF180Q9UJW8 692 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 FADS3Q9Y5Q0 445 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 DNM1LO00429 736 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 OR1F1O43749 312 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 ADARP55265 1226 aaKnown RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 TAF8Q7Z7C8 310 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
MBD3-201ENST00000156825 DENND2DQ9H6A0 471 aaPredicted RBP18.66■□□□□ 0.58
MBD3-201ENST00000156825 PRRC2BQ5JSZ5 2229 aaKnown RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 J3KR12 359 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 TCEA1P23193 301 aaKnown RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 CCND3P30281 292 aaPredicted RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 CTSKP43235 329 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 PLA2G16P53816 162 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 GPR135Q8IZ08 494 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 ZHX1-C8orf76Q96EF9 292 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 MAGEL2Q9UJ55 1249 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 NIPSNAP2O75323 286 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 FOXN2P32314 431 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 PTPN5P54829 565 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 AP1S1P61966 158 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 C6orf52Q5T4I8 152 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 VITQ6UXI7 678 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 SPATA19Q7Z5L4 167 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 C3orf14Q9HBI5 128 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 S100A14Q9HCY8 104 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 HMG20AQ9NP66 347 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 MFHAS1Q9Y4C4 1052 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 CXorf49A8MYA2 514 aaPredicted RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 SAP18O00422 153 aaKnown RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 KPNA4O00629 521 aaPredicted RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 TM7SF2O76062 418 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 SNUPNO95149 360 aaKnown RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 SIX3O95343 332 aaPredicted RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 ACVRL1P37023 503 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 HSPB3Q12988 150 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 PSMA8Q8TAA3 256 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 TEX47Q8TBZ9 253 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 TGDSO95455 350 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 RPL5P46777 297 aaKnown RBP18.65■□□□□ 0.58
MBD3-201ENST00000156825 NR1H2P55055 460 aa18.65■□□□□ 0.58
MBD3-201ENST00000156825 BNIP1Q12981 228 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms