RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 F11P03951 625 aa13□□□□□ -0.33
CTNS-201ENST00000046640 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 GJA1P17302 382 aa13□□□□□ -0.33
CTNS-201ENST00000046640 OXTRP30559 389 aa13□□□□□ -0.33
CTNS-201ENST00000046640 HK3P52790 923 aa13□□□□□ -0.33
CTNS-201ENST00000046640 EMP3P54852 163 aa13□□□□□ -0.33
CTNS-201ENST00000046640 PLCL1Q15111 1095 aa13□□□□□ -0.33
CTNS-201ENST00000046640 MAPRE2Q15555 327 aa13□□□□□ -0.33
CTNS-201ENST00000046640 ANKDD1AQ495B1 522 aa13□□□□□ -0.33
CTNS-201ENST00000046640 SAMD4BQ5PRF9 694 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 LYSMD3Q7Z3D4 306 aa13□□□□□ -0.33
CTNS-201ENST00000046640 GALNT7Q86SF2 657 aa13□□□□□ -0.33
CTNS-201ENST00000046640 RBM12BQ8IXT5 1001 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 CDYL2Q8N8U2 506 aa13□□□□□ -0.33
CTNS-201ENST00000046640 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
CTNS-201ENST00000046640 IGSF21Q96ID5 467 aa13□□□□□ -0.33
CTNS-201ENST00000046640 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
CTNS-201ENST00000046640 HGH1Q9BTY7 390 aa13□□□□□ -0.33
CTNS-201ENST00000046640 MRPL9Q9BYD2 267 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 TFB2MQ9H5Q4 396 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 CLK4Q9HAZ1 481 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 PNPLA3Q9NST1 481 aa13□□□□□ -0.33
CTNS-201ENST00000046640 TRMT6Q9UJA5 497 aaKnown RBP13□□□□□ -0.33
CTNS-201ENST00000046640 KERAO60938 352 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 KATNA1O75449 491 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 SLC26A3P40879 764 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CSKP41240 450 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 ANKS6Q68DC2 871 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 DUS1LQ6P1R4 473 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 GPR141Q7Z602 305 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 APCDD1Q8J025 514 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CRIPAKQ8N1N5 446 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 OR52B6Q8NGF0 335 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 BOCQ9BWV1 1114 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 MAP10Q9P2G4 905 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 ZNF225Q9UK10 706 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 USP22Q9UPT9 525 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 ZFC3H1O60293 1989 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 CASP8AP2Q9UKL3 1982 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 INPP4BO15327 924 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 SNX2O60749 519 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 VPS26AO75436 327 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 HSPA8P11142 646 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 TPP2P29144 1249 aaPredicted RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 LCP2Q13094 533 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CDH18Q13634 790 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 OR2T34Q8NGX1 318 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 OR2T3Q8NH03 318 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 SEPHS2Q99611 448 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 ADGRE3Q9BY15 652 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 TNKS2Q9H2K2 1166 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 INTS10Q9NVR2 710 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 TMEM181Q9P2C4 612 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 EVLQ9UI08 416 aaPredicted RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 CLEC4EQ9ULY5 219 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 LCHNA4D1U4 455 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 GIPC1O14908 333 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 ANGPT2O15123 496 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 OR4F21O95013 312 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 UGT1A1P22309 533 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 UGT1A4P22310 534 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 UGT1A3P35503 534 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 UGT1A5P35504 534 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CDK9P50750 372 aaKnown RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 SUOXP51687 545 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 NFKB2Q00653 900 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 CTBSQ01459 385 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 GALNT1Q10472 559 aaPredicted RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 AAK1Q2M2I8 961 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 C5orf22Q49AR2 442 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 NHSL2Q5HYW2 709 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 FEM1AQ9BSK4 669 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
CTNS-201ENST00000046640 DERL2Q9GZP9 239 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 VPS51Q9UID3 782 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 OAZ3Q9UMX2 235 aa12.99□□□□□ -0.33
CTNS-201ENST00000046640 MYO7AQ13402 2215 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 PIK3CGP48736 1102 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 IL2P60568 153 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 CYP4F8P98187 520 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 CREB5Q02930 508 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 NEDD8Q15843 81 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 RABL3Q5HYI8 236 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 ACBD5Q5T8D3 534 aaPredicted RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 KANK2Q63ZY3 851 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 MIER2Q8N344 545 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 RHEBL1Q8TAI7 183 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 CD200R1Q8TD46 325 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 C12orf43Q96C57 262 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms