RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 P01740 135 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Epb42P49222 691 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Sh3bp2Q06649 559 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Smim24Q0VG18 120 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 UcmaQ14BU0 138 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Skida1Q80YR3 822 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Efr3aQ8BG67 819 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ptbp2Q91Z31 531 aaKnown RBP13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Khdc3Q9CWU5 440 aa13.73□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Trbv4A0A075B5I2 113 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Kpna4O35343 521 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 SpibO35906 267 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Creb1Q01147 341 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mapkapk3Q3UMW7 384 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Naa11Q3UX61 218 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cep78Q6IRU7 790 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dennd5aQ6PAL8 1287 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Nmur2Q8BZ39 395 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Asb2Q8K0L0 634 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slc5a9Q8VDT1 685 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 SardhQ99LB7 919 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cpxm2Q9D2L5 764 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Q9D979 236 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Skp1Q9WTX5 163 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm28897A0A087WP44 222 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm5751A2AHC8 147 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fam181aJ3QNB7 292 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Rpl3P27659 403 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 DbtP53395 482 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tuba1cP68373 449 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tatdn1Q6P8M1 295 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dpy19l3Q71B07 716 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Zfp759Q7M6X3 721 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Prpf38bQ80SY5 542 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Zfp595Q8BIN6 625 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tspan9Q8BJU2 239 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 B3galt6Q91Z92 325 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Arpc2Q9CVB6 300 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ints11Q9CWS4 600 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Wdr55Q9CX97 388 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Capn10Q9ESK3 666 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gde1Q9JL56 331 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mid2Q9QUS6 705 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ssxb6A2BI74 170 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Man2b1O09159 1013 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 OsmrO70458 971 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mtnd4P03911 459 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 FesP16879 822 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dpf3P58269 378 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fbp2P70695 339 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mc1rQ01727 315 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ptchd3Q0EEE2 906 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Lsmem1Q3UQS2 128 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Sh3rf1Q69ZI1 892 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Slc25a23Q6GQS1 467 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 AW551984Q8BGF0 804 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mpp7Q8BVD5 576 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 SowahcQ8C0J6 512 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Lrrc66Q8K0B3 872 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Golm1Q91XA2 393 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Glod5Q9D8I3 148 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Serpinb9cI7HJI5 387 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Vmn2r2L7N2E9 908 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Icam1P13597 537 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cxcl12P40224 93 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ctps2P70303 586 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pou1f1Q00286 291 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 1810049J17RikQ3V2G9 153 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Sf1Q64213 653 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr1037Q7TR84 321 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr538Q7TRT5 310 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Fndc11Q80WB0 326 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Wdtc1Q80ZK9 677 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Adnp2Q8CHC8 1165 aaKnown RBP13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Ugt2b34Q8K154 532 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Mcoln3Q8R4F0 553 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 TraipQ8VIG6 470 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Cyp4f13Q99N19 523 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 P2yr13Q9D8I2 337 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 IvdQ9JHI5 424 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Il22Q9JJY9 179 aa13.72□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Irs2P81122 1321 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 GaltQ03249 379 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 H2-Q2Q4KN81 360 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Adam2Q60718 735 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Lcn3Q62471 182 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Q8BGK9 164 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Tusc3Q8BTV1 347 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Pabpc5Q8C7D3 381 aaKnown RBP13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Prmt5Q8CIG8 637 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Olfr1467Q8VFW1 308 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 MpstQ99J99 297 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Dnajc18Q9CZJ9 357 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 CenpnQ9CZW2 337 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Extl1Q9JKV7 669 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Myh11O08638 1972 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Myh8P13542 1937 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Gm12394A2AKP6 982 aa13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Trmt1lA2RSY6 728 aaKnown RBP13.71□□□□□ -0.21
Pcdha1-202ENSMUST00000193839 Zfp963D3Z2T8 383 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms