RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Fam105aQ3TVP5 353 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Nxph1Q61200 271 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Mc2rQ64326 296 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Sgo2Q7TSY8 1164 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 H2-M10.5Q85ZW7 330 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Tmem214Q8BM55 687 aaKnown RBP30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Cep68Q8C0D9 733 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Dusp15Q8R4V2 235 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Aim2Q91VJ1 354 aaKnown RBP30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Pycr1Q922W5 309 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Ferd3lQ923Z4 168 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Nup205A0A0J9YUD5 2061 aaKnown RBP30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Fer1l5P0DM40 2038 aa30.05■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gm45233A0A0N4SVE0 221 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Olfr566A0A1B0GST0 319 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Il1aP01582 270 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Atp1b2P14231 290 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Tial1P70318 392 aaKnown RBP30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Serpina6Q06770 397 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 HadhaQ8BMS1 763 aaKnown RBP30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Zfp398Q8BV16 643 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Exd1Q8CDF7 570 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Laptm4bQ91XQ6 227 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Lztfl1Q9JHQ5 299 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Nt5c1aA3KFX0 365 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Lrriq4A6H6A4 596 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Tmem45a2B7ZWJ5 289 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Ptar1E9QAB6 424 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gucd1Q8BZI6 239 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Vps39Q8R5L3 886 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Map3k21Q8VDG6 1002 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 MgarpQ8VI64 283 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Vsx1Q91V10 363 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Erlin1Q91X78 346 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Vps33aQ9D2N9 598 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 AcadsbQ9DBL1 432 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Slc40a1Q9JHI9 570 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Tnfsf14Q9QYH9 239 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Smok2bQ9QYZ3 484 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Smok2aQ9QYZ6 504 aa30.04■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gm35911A0A1D5RLS7 214 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 FaslgP41047 279 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gabrb3P63080 473 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Serpinb5P70124 375 aaKnown RBP30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gpr165Q3V3A3 455 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Otol1Q4ZJM7 482 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 MarcoQ60754 518 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 N4bp1Q6A037 893 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Cyp2d40Q6P8N9 338 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Olfr1152Q7TR34 310 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Znf76Q8BMU0 568 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Krt222Q8CCX5 294 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Slc5a11Q8K0E3 673 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Chrna3Q8R4G9 499 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Alg9Q8VDI9 611 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Pcdhga9Q91XX9 932 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Nt5cQ9JM14 200 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Vmn2r25W4VSP2 855 aa30.03■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Ncam2O35136 837 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Kpna3O35344 521 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 AladP10518 330 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 HalP35492 657 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Prdm6Q3UZD5 596 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Eef2kmtQ3UZW7 335 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Cpa6Q5U901 438 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 ChukQ60680 745 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Lrfn3Q8BLY3 626 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Cers6Q8C172 384 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Fam69bQ99ML4 431 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Commd8Q9CZG3 183 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Spag4Q9JJF2 443 aa30.02■■■□□ 2.4
Ctdnep1-201ENSMUST00000108593 Gm45140A0A0N4SUM8 220 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Vmn2r112L7N221 857 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Dnmt3cP0DOY1 709 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Srp54P14576 504 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 GiprQ0P543 460 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Nab1Q61122 486 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Hbs1lQ69ZS7 682 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Ssx9Q6XAS3 170 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Klhl29Q80T74 875 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Pced1bQ8BGX1 433 aaKnown RBP30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Lsm14bQ8CGC4 385 aaKnown RBP30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Treml1Q8K558 317 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Vmn1r87Q8R255 295 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Olfr273Q8VG87 317 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Det1Q9D0A0 550 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 CasrQ9QY96 1079 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Tmem115Q9WUH1 350 aa30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Ddx39bQ9Z1N5 428 aaKnown RBP30.01■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Gm29554A0A087WNW4 188 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 ChrngP04760 519 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 UoxP25688 303 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Mmp13P33435 472 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 QrfprP83861 433 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Fpr-rs6Q3SXG2 339 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Skap2Q3UND0 358 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 MybphlQ5FW53 355 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Dcun1d2Q8BZJ7 259 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Olfr868Q8VFI8 309 aa30■■■□□ 2.39
Ctdnep1-201ENSMUST00000108593 Cdhr1Q8VHP6 859 aa30■■■□□ 2.39
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms