RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tex13c3Q810P0 219 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pgs1Q8BHF7 553 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Bend5Q8C6D4 421 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Diras1Q91Z61 198 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cd209eQ91ZW7 208 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 AdprmQ99KS6 340 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Efcab1Q9D3N2 212 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olig2Q9EQW6 323 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tuba8Q9JJZ2 449 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 LctF8VPT3 1931 aa11.47□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm13212B1ASQ7 799 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Phf11cB4XVP9 339 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm4871D3Z0W7 314 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Vmn2r17E9PYF5 849 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr620E9PZ66 313 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Speer4cG3UXD1 256 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm10354K7N6A0 256 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Apex1P28352 317 aaKnown RBP11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rab8aP55258 207 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nfatc3P97305 1075 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfml2bQ3V1G4 746 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fzd6Q61089 709 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ifit3Q64345 403 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr1198Q7TR12 308 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr813Q7TRH5 310 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mfn1Q811U4 741 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tmtc4Q8BG19 741 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hspa13Q8BM72 471 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Kcnv1Q8BZN2 503 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lurap1lQ8K2P1 221 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ebf4Q8K4J2 599 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 IlkapQ8R0F6 392 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hid1Q8R1F6 788 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TbccQ8VCN9 341 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rprd1aQ8VDS4 312 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cmc1Q9CPZ8 106 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gemin2Q9CQQ4 269 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Oxct2bQ9ESL0 520 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Oxct2aQ9JJN4 520 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Sept5Q9Z2Q6 369 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 TriobpQ99KW3 2014 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fam131cA2ADB2 273 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Sult2a6B2RVI8 285 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm20503G3UZK1 150 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Galnt1O08912 559 aaKnown RBP11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 YwhahP68510 246 aaKnown RBP11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Kansl1lQ5DTI6 991 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Lingo3Q6GQU6 589 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pex11gQ6P6M5 241 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Magee1Q6PCZ4 918 aaKnown RBP11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Bend6Q6PFX2 281 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr1252Q7TQZ2 314 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr1128Q7TR47 311 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nrn1lQ8C4W3 162 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 BicralQ8CHH5 1074 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 ManbaQ8K2I4 879 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Znf668Q8K2R5 619 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr273Q8VG87 317 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Socs7Q8VHQ2 579 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Paip2bQ91W45 136 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ptbp2Q91Z31 531 aaKnown RBP11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tmem135Q9CYV5 458 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hddc3Q9D114 179 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 4933425L06RikQ9D3Z8 585 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 AcadsbQ9DBL1 432 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc6a14Q9JMA9 638 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Epb41l4bQ9JMC8 527 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 ThadaA8C756 1938 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Myo10F8VQB6 2062 aa11.46□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Man1b1A2AJ15 658 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Itga8A2ARA8 1062 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Lgr4A2ARI4 951 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pgbd1E9Q492 415 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fgf10O35565 209 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 SpnP15702 395 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pros1Q08761 675 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Brms1lQ3U1T3 323 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 NkaplQ5SZT7 395 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Kmt5cQ6Q783 468 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Mgat5bQ765H6 792 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Svs2Q8BS30 375 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Hs3st5Q8BSL4 346 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Csnk1g1Q8BTH8 459 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 GmppbQ8BTZ7 360 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ifi44Q8BV66 422 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Lrch3Q8BVU0 778 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Thop1Q8C1A5 687 aaKnown RBP11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Piwil2Q8CDG1 971 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 AcmsdQ8R519 336 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Atoh8Q99NA2 322 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 AasdhpptQ9CQF6 309 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rnf181Q9CY62 165 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Plscr1Q9JJ00 328 aa11.46□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Cyp4a29A0A087WPC3 509 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 6720489N17RikA0A1Y7VJW0 127 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Smurf2A2A5Z6 748 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Zscan5bB2RTN3 468 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gm8267E9Q207 261 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Obox5G3X9P6 291 aa11.45□□□□□ -0.58
Col9a1-202ENSMUST00000088349 RfngO09009 332 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms