RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Olfr128Q7TRJ1 308 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 SnphQ80U23 495 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Usp8Q80U87 1080 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prox2Q8BII1 593 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kcns3Q8BQZ8 491 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Q8BR90 294 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ctxn3Q8BXZ0 80 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Trim35Q8C006 501 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 4930504O13RikQ8C5Z9 145 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gin1Q8K259 518 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vps4aQ8VEJ9 437 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr1254Q8VFB1 314 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr638Q8VH20 321 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 GMCL1P1Q99N64 498 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cep41Q99NF3 373 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ankrd61Q9CQM6 421 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gnpda2Q9CRC9 276 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Q9CX63 252 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hint2Q9D0S9 163 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nol3Q9D1X0 220 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Efhc2Q9D485 750 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Subh2bvQ9D9Z7 123 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CoasyQ9DBL7 563 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fzd5Q9EQD0 585 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tubb3Q9ERD7 450 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Aldh1a3Q9JHW9 512 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 PerpQ9JK95 193 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Krt16Q9Z2K1 469 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rbm6S4R1W5 1118 aaKnown RBP8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Npc1l1Q6T3U4 1333 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tnfrsf25B1AWN9 411 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CrnnD3YUU6 520 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 C130060K24RikG3UWA8 416 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fabp9O08716 132 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dhx15O35286 795 aaKnown RBP8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mdm4O35618 489 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 EnamO55196 1274 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mcpt2P15119 244 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nkx2-6P43688 289 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 E2f2P56931 443 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 YwhaqP68254 245 aaKnown RBP8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Epha4Q03137 986 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pik3r6Q3U6Q4 756 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm10775Q3V290 127 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 MslnQ61468 625 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ppp2r2bQ6ZWR4 443 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CcnyQ8BGU5 341 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Susd4Q8BH32 490 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pomgnt2Q8BW41 605 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nmur2Q8BZ39 395 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Q8BZE1 841 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Apol9bQ8C7I4 310 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc26a6Q8CIW6 758 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hacd3Q8K2C9 362 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Apol9aQ8VDU3 310 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr768Q8VGC4 312 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 B3gnt9Q8VI16 399 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Krt5Q922U2 580 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gprc5bQ923Z0 410 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc22a30Q96LX3 552 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pwp1Q99LL5 501 aaKnown RBP8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Efcab9Q9DAM2 216 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Plekho1Q9JIY0 408 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Piwil1Q9JMB7 862 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vstm2bQ9JME9 285 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Skp1Q9WTX5 163 aa8.99□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm20489A2AGH5 449 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zfp839E9PUU5 921 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r22E9Q7S8 853 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm20503G3UZK1 150 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r21K7N6Y7 853 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r20L7N2B1 853 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 H2-Q1O19441 368 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CidebO70303 219 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mtx2O88441 263 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fkbp1aP26883 108 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 DctP29812 517 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 StsP50427 624 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hsd11b2P51661 386 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dlg3P70175 849 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 NogP97466 232 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ces2fQ08ED5 561 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Asprv1Q09PK2 339 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nlrx1Q3TL44 975 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 SbplQ3TUY3 232 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prkaa1Q5EG47 559 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Taar3Q5QD16 343 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Bpifb1Q61114 474 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rbm12b2Q66JV4 834 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ino80dQ66JY2 873 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fam110dQ80X91 271 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pdzph1Q8BGR1 1238 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 C5ar2Q8BW93 344 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 E4f1Q8CCE9 783 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ufl1Q8CCJ3 793 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sept8Q8CHH9 429 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 FntbQ8K2I1 437 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 IrgqQ8VIM9 583 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rmnd5bQ91YQ7 393 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fgd4Q91ZT5 766 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms