RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Polr2lP62876 67 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Atp2a3Q64518 1038 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Klhl23Q6GQU2 558 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Kcnk12Q76M80 430 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gabra5Q8BHJ7 463 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Bmt2Q8BXK4 403 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tex46Q9CPU3 165 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 StambpQ9CQ26 424 aa22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Top3bQ9Z321 862 aaKnown RBP22.66■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fam166bA2AIP0 273 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cyp2w1E9Q816 493 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 IghgP01863 330 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Aup1P70295 410 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Q3TYS2 187 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Brsk2Q69Z98 735 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nudcd1Q6PIP5 582 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 PolnQ7TQ07 864 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Ppp4r4Q8C0Y0 875 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pgm2l1Q8CAA7 621 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Treml1Q8K558 317 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 DolkQ8R2Y3 534 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pcdhga10Q91XY9 930 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Papd4Q91YI6 484 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Fam227aQ9D3V8 625 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 4933428M09RikQ9D3X3 192 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 4933425L06RikQ9D3Z8 585 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Nif3l1Q9EQ80 376 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 PigqQ9QYT7 581 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 HnrnpcQ9Z204 313 aaKnown RBP22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Adamts20P59511 1906 aa22.65■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Olfr566A0A1B0GST0 319 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Mkrn2osD3Z393 217 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gm20721E9Q2U8 318 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Kbtbd2G3X9X1 623 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Hoxa4P06798 285 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Cd80Q00609 306 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Pdp2Q504M2 532 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Elavl3Q60900 367 aaKnown RBP22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Jak2Q62120 1129 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Dusp16Q6PCP3 660 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Trim14Q8BVW3 440 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tfb1mQ8JZM0 345 aaKnown RBP22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Tgif2lx2Q8K5B9 231 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Bbs2Q9CWF6 721 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Q9D1Z2 194 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Actl7aQ9QY84 440 aa22.64■■□□□ 1.22
Upf3a-201ENSMUST00000043767 Gm13090A2A899 111 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Mcf2A2AEU1 1111 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Pnldc1B2RXZ1 531 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Adamtsl5D3Z689 485 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 PtgdsO09114 189 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Nedd9O35177 833 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 ItgalP24063 1163 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Serpinb5P70124 375 aaKnown RBP22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Bpifb1Q61114 474 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Gm13199Q8C8E0 125 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Homer3Q99JP6 356 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 2010005H15RikQ9D8D6 97 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ap2b1Q9DBG3 937 aa22.64■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ccdc175E9PVB3 822 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Mpp1P70290 466 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Nfatc2Q60591 927 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Cyp1b1Q64429 543 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Stx3Q64704 289 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Mvb12aQ78HU3 271 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ankrd9Q8BH83 326 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Gpr158Q8C419 1200 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Eva1bQ8K2Y3 164 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Olfr45Q8VGM1 311 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 PompQ9CQT5 141 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Olfr706Q9EPF8 316 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Chrac1Q9JKP8 129 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ak1Q9R0Y5 194 aa22.63■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Tmem45a2B7ZWJ5 289 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Nccrp1G3X9C2 266 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 MutP16332 748 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Mthfd2P18155 350 aaKnown RBP22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 GpamQ61586 827 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Krt73Q6NXH9 539 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Kctd12Q6WVG3 327 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ccdc184Q8BMK5 191 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Kiaa1671Q8BRV5 308 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Slc6a20aQ8VDB9 592 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Fam192aQ91WE2 254 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Pmf1Q9CPV5 202 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Spag6Q9JLI7 507 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Ruvbl2Q9WTM5 463 aaKnown RBP22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Vmn2r21K7N6Y7 853 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Vmn2r20L7N2B1 853 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Fcgr1P26151 404 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Fpr-rs6Q3SXG2 339 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Arid5aQ3U108 590 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 B430218F22RikQ8BQR5 223 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Spats2lQ91WJ7 558 aaKnown RBP22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 LipfQ9CPP7 395 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 AenQ9CZI9 336 aaKnown RBP22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Sertad3Q9ERC3 197 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Cngb3Q9JJZ9 694 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Adam24Q9R160 761 aa22.62■■□□□ 1.21
Upf3a-201ENSMUST00000043767 Cyp2a22B2RXZ2 492 aa22.61■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms