RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rps9Q6ZWN5 194 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dnajc16Q80TN4 772 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pwp2Q8BU03 919 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Katnbl1Q9CWJ3 299 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ephx1Q9D379 455 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tmem236A2ARJ3 344 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cldn24D3YXJ9 220 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm5478D3Z6R0 159 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tsc22d2E9Q7M2 769 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 EnpepP16406 945 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Coq7P97478 217 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cxcr5Q04683 374 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cyb5r4Q3TDX8 528 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc22a23Q3UHH2 689 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr735Q7TRM4 354 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr664Q7TRP5 306 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Guf1Q8C3X4 651 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pabpc5Q8C7D3 381 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PvrQ8K094 408 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr371Q8VGB8 312 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nudt14Q9D142 222 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cib1Q9Z0F4 191 aa10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 HnrnpdlQ9Z130 301 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam217bA2AJW5 387 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MndalD0QMC3 538 aaKnown RBP10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ptar1E9QAB6 424 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nudt2P56380 147 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Col6a2Q02788 1034 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CilpQ66K08 1184 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cand1Q6ZQ38 1230 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr1046Q7TR79 316 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Sra1Q80VJ2 232 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pcdhb16Q91Y03 802 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Traf7Q922B6 594 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Clp1Q99LI9 425 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lgals2Q9CQW5 130 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Phf10Q9D8M7 497 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Il21rQ9JHX3 529 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TesminQ9WTJ6 475 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Map2k5Q9WVS7 448 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr521E9Q519 321 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm10722F6VLK5 217 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Asna1O54984 348 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 ThrbP37242 461 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Usp46P62069 366 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hdgfl2Q3UMU9 669 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MslnQ61468 625 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp2r1Q6VVW9 501 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Plekha6Q7TQG1 1173 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Klhl26Q8BGY4 606 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Samd7Q8C8Y5 445 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tfb1mQ8JZM0 345 aaKnown RBP10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp2j9Q924D1 502 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 AasdhpptQ9CQF6 309 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kcnq4Q9JK97 696 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Asap1Q9QWY8 1147 aa10.21□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp142G5E869 1843 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 2310061I04RikB8JJ69 315 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Grk4O70291 574 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mybpc3O70468 1270 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lhx1P63006 406 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ctnnb1Q02248 781 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Sh3bp2Q06649 559 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyb5r2Q3KNK3 276 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dennd1bQ3U1T9 766 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zmat1Q3V0C1 714 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cln3Q61124 438 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gata6Q61169 589 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Arhgap11aQ80Y19 987 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 N4bp2l2Q8JZS6 575 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp940Q8R2Q3 566 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr1311Q8VET0 312 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr183Q8VFB9 309 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Adgre4Q91ZE5 689 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Prelid3bQ9CYY7 195 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem81Q9D5K1 259 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lrrc34Q9DAM1 415 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Syt5Q9R0N5 386 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Orc6Q9WUJ8 262 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm2956E9PVJ0 216 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Krt83E9Q1Y9 479 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm8108K7N734 216 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm3488M0QW81 238 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Btg4O70552 250 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Atxn1lP0C7T6 687 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dpy19l2P0CW70 773 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rnf19aP50636 840 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rgs14P97492 547 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fads2p1Q0VAX3 487 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Elf3Q3UPW2 391 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 A630001G21RikQ3UTB2 229 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Trcg1Q58Y74 825 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Adgre1Q61549 931 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zc4h2Q68FG0 224 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lingo3Q6GQU6 589 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Trit1Q80UN9 467 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rdh12Q8BYK4 316 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam78aQ8C552 283 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp4f3Q99N16 524 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Q9CQF4 240 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms