RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Fam189bQ5HZJ5 669 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Map3k10Q66L42 940 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 ManealQ6P1J0 452 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Defb34Q7TNV8 81 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Arhgap12Q8C0D4 838 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Cdkal1Q91WE6 578 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 KmoQ91WN4 479 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Mrpl45Q9D0Q7 306 aaKnown RBP18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Snrnp48Q9D361 337 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 MrrfQ9D6S7 262 aaKnown RBP18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pidd1Q9ERV7 915 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 NfkbizQ9EST8 728 aa18.2■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 E2f3O35261 457 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kcnab3P97382 249 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Trappc9Q3U0M1 1148 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Plk5Q4FZD7 595 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 MlipQ5FW52 269 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 MslnQ61468 625 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Q8BP99 230 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Chst8Q8BQ86 417 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Tmem62Q8BXJ9 643 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gin1Q8K259 518 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Mtg1Q8R2R6 326 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pole4Q9CQ36 118 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Rgs1Q9JL25 209 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 IkbkeQ9R0T8 717 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 A6H6Q4 206 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Tmem45a2B7ZWJ5 289 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Spdye4cI6XKQ3 339 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Polr2jO08740 117 aaKnown RBP18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pdha2P35487 391 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Lrrc3P59034 257 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Smpdl3aP70158 445 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Cpped1Q8BFS6 312 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Vps50Q8CI71 964 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Nckap1lQ8K1X4 1134 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Vmn1r203Q8R273 311 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 AcmsdQ8R519 336 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Guca1bQ8VBV8 201 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 WwoxQ91WL8 414 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 HnrnpabQ99020 285 aaKnown RBP18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 St7Q99M96 577 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Dph2Q9CR25 489 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ist1Q9CX00 362 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Rnf146Q9CZW6 359 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gid8Q9D7M1 228 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ninj2Q9JL89 143 aa18.19■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Itga8A2ARA8 1062 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Zfp938E9Q9G3 579 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 ClockO08785 855 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pik3cdO35904 1043 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 JunbP09450 344 aaKnown RBP18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gna12P27600 379 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pxmp2P42925 194 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Hspa8P63017 646 aaKnown RBP18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 CenplQ3U3S3 329 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Foxk2Q3UCQ1 651 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 StradaQ3UUJ4 431 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Sfr1Q8BP27 319 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 4921511C20RikQ8BVT7 469 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Asz1Q8VD46 475 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 MpstQ99J99 297 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pwp1Q99LL5 501 aaKnown RBP18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Lrrc18Q9CQ07 262 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 CatsperzQ9CQP8 194 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kif26aQ52KG5 1881 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gm9857F7CXR1 130 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Pdx1P52946 284 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Tuba4aP68368 448 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 IdsQ08890 552 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kif18bQ6PFD6 834 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Olfr412Q7TRW7 312 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Amigo2Q80ZD9 519 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Rd3Q8BRE0 195 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Thop1Q8C1A5 687 aaKnown RBP18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ppp1r8Q8R3G1 351 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Mmgt2Q8R3L0 123 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gramd1aQ8VEF1 722 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Olfr183Q8VFB9 309 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 EedQ921E6 441 aaKnown RBP18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Scd3Q99PL7 359 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Rai2Q9QVY8 529 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Smok1Q9QYZ4 484 aa18.18■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gm17175E9Q528 179 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gm10477F6SW83 55 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gm3642K7N6V4 267 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Vmn2r2L7N2E9 908 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Gm6614M0QWR8 670 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ackr2O08707 378 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ncam2O35136 837 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 TpmtO55060 240 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Aif1O70200 147 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Phkg1P07934 388 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Flt3lgP49772 232 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Prickle1Q3U5C7 832 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Cyp2j13Q3UNV4 503 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kctd21Q3URF8 260 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kiaa1841Q68FF0 718 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Adamts16Q69Z28 1222 aa18.17■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Nlgn2Q69ZK9 836 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms