RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Traf2P39429 501 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Faf1P54731 649 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ptpn5P54830 541 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Smpdl3bP58242 456 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Pitx1P70314 315 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Patl1Q3TC46 770 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Yy2Q3TTC2 378 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ccdc61Q3UJV1 511 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Magee2Q52KG3 523 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Map2k2Q63932 401 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Defa17Q64016 82 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ttc24Q8BYG0 334 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Nox1Q8CIZ9 591 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Hacd3Q8K2C9 362 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Rab15Q8K386 212 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Pitrm1Q8K411 1036 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Sirt3Q8R104 334 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr695Q8VFM3 315 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr348Q8VGK3 313 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 NpntQ91V88 561 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Pcdha8Q91Y12 946 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Pycr2Q922Q4 320 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 PrkxQ922R0 355 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 S100a14Q9D2Q8 104 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Prmt1Q9JIF0 371 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc6a14Q9JMA9 638 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Gria3Q9Z2W9 888 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 4921501E09RikA0A0R4J054 908 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ctnnd2O35927 1247 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 C1qbP14106 253 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Cd247P24161 164 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Pax3P24610 479 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Psmb9P28076 219 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 DckP43346 260 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Kcnab3P97382 249 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Krt80Q0VBK2 452 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Zfp78Q5U406 512 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 TsnQ62348 228 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Sgo2Q7TSY8 1164 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Fam83eQ80XS7 481 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 B3gnt5Q8BGY6 376 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Adgrf1Q8VEC3 908 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Nuf2Q99P69 463 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ifi44lQ9BDB7 447 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Q9D1K7 174 aaKnown RBP16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Ddi1Q9DAF3 408 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Cyp3a44Q9EQW4 504 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Plod2Q9R0B9 737 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 IkbkeQ9R0T8 717 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Osbpl10S4R1M9 766 aa16.27■□□□□ 0.2
Shh-201ENSMUST00000002708 Fam166bA2AIP0 273 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Rhox3cA2AWM0 215 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Ifit3bE9PV48 403 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Rnf169E9Q7F2 694 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Rhox3hL7MU37 215 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Gp5O08742 567 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Gabrr2P56476 465 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Hspa8P63017 646 aaKnown RBP16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Rhox3aQ4TU90 215 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Slc6a3Q61327 619 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Cox8aQ64445 69 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Defb34Q7TNV8 81 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Tmem62Q8BXJ9 643 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 D8Ertd738eQ8R1F0 94 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Hdac11Q91WA3 347 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Ndufaf4Q9D1H6 173 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Alg13Q9D8C3 1166 aaKnown RBP16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Gsdmdc1Q9D8T2 487 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Olfr703Q9EPF5 319 aa16.27■□□□□ 0.19
Shh-201ENSMUST00000002708 Gm21083A0A0G2JFD5 256 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Drd4P51436 387 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 TgfbiP82198 683 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Gpatch4Q3TFK5 415 aaKnown RBP16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Mvb12bQ6KAU4 317 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Rps9Q6ZWN5 194 aaKnown RBP16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Gpr141Q7TQP0 305 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Asrgl1Q8C0M9 326 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Sept8Q8CHH9 429 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Mab21L3Q8CI17 429 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Nckap1lQ8K1X4 1134 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Cant1Q8VCF1 403 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Nrbf2Q8VCQ3 287 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Asz1Q8VD46 475 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 DcxrQ91X52 244 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Aldh1a3Q9JHW9 512 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Rfc2Q9WUK4 349 aaKnown RBP16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Mcf2A2AEU1 1111 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Acnat1A2AKK5 416 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Cilp2D3Z7H8 1162 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 WarsP32921 481 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Cd9P40240 226 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Rnf19aP50636 840 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 MtpnP62774 118 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Igfbp7Q61581 281 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 SvoplQ6PDF3 494 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Chil6Q80W26 440 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 KyQ8C8H8 661 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Cacnb2Q8CC27 655 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Q8CDN1 933 aa16.26■□□□□ 0.19
Shh-201ENSMUST00000002708 Atoh8Q99NA2 322 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms