RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 PglsQ9CQ60 257 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4931417E11RikQ9CR05 305 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem9Q9CR23 183 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mrpl17Q9D8P4 176 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ptges3lQ9D9A7 131 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc19a2Q9EQN9 498 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Epm2aQ9WUA5 330 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm7792A0A0J9YU01 481 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Klhdc7aA2APT9 773 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3183D3YUJ6 481 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm6685D3YYP3 228 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3139J3QK78 481 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3106J3QPH3 481 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm4778L7N229 365 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fam71e2L7N480 754 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MndaP0DOV1 425 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ccnb2P30276 398 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpina7P61939 418 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dok6Q2MHE5 331 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ppp3r1Q63810 170 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rad54bQ6PFE3 886 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr684Q7TRN8 312 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zswim5Q80TC6 1188 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Avl9Q80U56 649 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ttc29Q80VM3 471 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cyth4Q80YW0 393 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tm9sf4Q8BH24 643 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sult5a1Q91X36 291 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem159Q922Z1 161 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dusp26Q9D700 211 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ifrd2Q9D8U0 441 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lrrc34Q9DAM1 415 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sppl2aQ9JJF9 523 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nectin3Q9JLB9 549 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Map3k14Q9WUL6 942 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Shank2Q80Z38 1476 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm45208A0A140LJ36 292 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 9630041A04RikD3Z3U4 205 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4933408B17RikG3X9B4 273 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc22a1O08966 556 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tuba1bP05213 451 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Oprl1P35377 367 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gli1P47806 1111 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tuba1aP68369 451 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tuba1cP68373 449 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cpne7Q0VE82 557 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc22a16Q497L8 649 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Efcab3Q80X60 432 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dppa4Q8CCG4 296 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Clip4Q8CI96 704 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cers2Q924Z4 380 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slco1a1Q9QXZ6 670 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sult6b2B7ZWN4 290 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm11397F6V5V4 377 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm11027G8JL69 66 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 KlO35082 1014 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hs3st1O35310 311 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Asgr1P34927 284 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tnfsf4P43488 198 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr681Q3SXH8 315 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nemp1Q6ZQE4 437 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpinb9fQ80UK5 377 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mgat4aQ812G0 535 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gprc5aQ8BHL4 356 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4933402J07RikQ8BHX0 270 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 DseQ8BLI4 958 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znf436Q8BPP0 452 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pp2d1Q8BVT6 620 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lrit1Q8K099 624 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr348Q8VGK3 313 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr679Q8VGV0 315 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpinb9gQ8VHQ1 377 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gpihbp1Q9D1N2 228 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Krtap5-3Q9D226 196 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mllt3A2AM29 569 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Aldh3b3J3QMK6 479 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gtpbp1O08582 668 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Stxbp1O08599 594 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bub1O08901 1058 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Neurod4O09105 330 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Psmd4O35226 376 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc6a6O35316 621 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TgfbiP82198 683 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Meis2P97367 477 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm45902Q3UDN3 361 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znf512Q69Z99 562 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfm2Q8BM13 448 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ccser1Q8C0C4 895 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr806Q8VFI2 313 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lrp8Q924X6 996 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mrps5Q99N87 432 aaKnown RBP9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Commd4Q9CQ02 199 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Exoc2Q9D4H1 924 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vwa7Q9JHA8 891 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znhit2Q9QY66 399 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Otud3B1AZ99 396 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znf382B2RXC5 579 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Serpina3jD3Z451 420 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 B020004C17RikJ3QP07 232 aa9.09□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Plin2P43883 425 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms