RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 GDPD4Q6W3E5 623 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 ATG14Q6ZNE5 492 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 ERN2Q76MJ5 926 aaKnown RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 CEP68Q76N32 757 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 LPCAT2Q7L5N7 544 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 KDELC2Q7Z4H8 507 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 ALYREFQ86V81 257 aaKnown RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 CILP2Q8IUL8 1156 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 CEP97Q8IW35 865 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 RYBPQ8N488 228 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 CHST14Q8NCH0 376 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 OR2T34Q8NGX1 318 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 GRIN3AQ8TCU5 1115 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 KCTD4Q8WVF5 259 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 MRPL57Q9BQC6 102 aaKnown RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 BTBD10Q9BSF8 475 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 GATA5Q9BWX5 397 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 TPSD1Q9BZJ3 242 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 DRC3Q9H069 523 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 DUSP15Q9H1R2 295 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 MTG2Q9H4K7 406 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 SUV39H2Q9H5I1 410 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 NOD2Q9HC29 1040 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 SCUBE2Q9NQ36 999 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 POLR3BQ9NW08 1133 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 MARCOQ9UEW3 520 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 EVLQ9UI08 416 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 RAB23Q9ULC3 237 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 RUVBL2Q9Y230 463 aaKnown RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 APOBEC2Q9Y235 224 aaKnown RBP10.19□□□□□ -0.78
PHGDH-224ENST00000641711 PCDHGA5Q9Y5G8 931 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 ACTL7AQ9Y615 435 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 MYLKQ15746 1914 aa10.19□□□□□ -0.78
PHGDH-224ENST00000641711 EP300Q09472 2414 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 A0A1W2PP55 124 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 C10orf142B7Z368 130 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 H0Y858 1186 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PLRG1O43660 514 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 NDUFS2O75306 463 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 SEMA4FO95754 770 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 S1PR4O95977 384 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 UGT2B4P06133 528 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 KITP10721 976 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 ADRB3P13945 408 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 OGNP20774 298 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 SERPINB5P36952 375 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 RGRP47804 291 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 NUMBP49757 651 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 IDH3AP50213 366 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 SCNN1BP51168 640 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 CCR5P51681 352 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 ARSDP51689 593 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 DMWDQ09019 674 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PLK5Q496M5 336 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 WASHC2DQ5SRD0 308 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 AGBL4Q5VU57 503 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 LAIR1Q6GTX8 287 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 CNSTQ6PJW8 725 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 NAPRTQ6XQN6 538 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PARS2Q7L3T8 475 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 MAVSQ7Z434 540 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 RABEPKQ7Z6M1 372 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 TTC7BQ86TV6 843 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 TRIM69Q86WT6 500 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 RAVER1Q8IY67 606 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 FSTL5Q8N475 847 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 HDDC3Q8N4P3 179 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 AADATQ8N5Z0 425 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PDCD6IPQ8WUM4 868 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 HDAC10Q969S8 669 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PRR11Q96HE9 360 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 ELMO2Q96JJ3 720 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 CCDC106Q9BWC9 280 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 CDH19Q9H159 772 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 MRPL46Q9H2W6 279 aaKnown RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 MMADHCQ9H3L0 296 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 IGSF5Q9NSI5 407 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 PNPOQ9NVS9 261 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 CYP8B1Q9UNU6 501 aa10.18□□□□□ -0.78
PHGDH-224ENST00000641711 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-224ENST00000641711 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 TTC24A2A3L6 582 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-224ENST00000641711 C16orf96A6NNT2 1141 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 SLCO1B7G3V0H7 640 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 TK2O00142 265 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 TSPAN6O43657 245 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 DLX3O60479 287 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 NPHS1O60500 1241 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 LRP3O75074 770 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 RNASEH2AO75792 299 aaKnown RBP10.17□□□□□ -0.78
PHGDH-224ENST00000641711 CRTAMO95727 393 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 HSPA4LO95757 839 aa10.17□□□□□ -0.78
PHGDH-224ENST00000641711 ESRRAP11474 423 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-224ENST00000641711 CCND1P24385 295 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms