RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FEM1CQ96JP0 617 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TBL1YQ9BQ87 522 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 DPH2Q9BQC3 489 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 FICDQ9BVA6 458 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 STARD13Q9Y3M8 1113 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 LOC285095A0A1B0GVY8 99 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 ANTXRLA6NF34 631 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 K7EQS6 105 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 RTCAO00442 366 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 EIF3HO15372 352 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 BANF1O75531 89 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 SKAP2O75563 359 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 KIAA0754O94854 1291 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 EPOP01588 193 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CKMT1AP12532 417 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CNTFP26441 200 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 MAOBP27338 520 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TNFRSF4P43489 277 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CHRNA4P43681 627 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CCNHP51946 323 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TRAF2Q12933 501 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 PDIA2Q13087 525 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 ZNF234Q14588 700 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 FASTKD3Q14CZ7 662 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 MYLK3Q32MK0 819 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TTC31Q49AM3 519 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CARD16Q5EG05 197 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TMEM196Q5HYL7 178 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 ZBTB37Q5TC79 503 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 IRGCQ6NXR0 463 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 DPY19L3Q6ZPD9 716 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 CEP128Q6ZU80 1094 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 KDELC2Q7Z4H8 507 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 OR2A12Q8NGT7 310 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TRIB3Q96RU7 358 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TREX2Q9BQ50 279 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 WDR83Q9BRX9 315 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TDRD1Q9BXT4 1180 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TMEM245Q9H330 911 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 SAYSD1Q9NPB0 183 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 PIH1D1Q9NWS0 290 aaKnown RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 THAP10Q9P2Z0 257 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 HECAQ9UBI9 543 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-220ENST00000640076 DUSP12Q9UNI6 340 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 GPR34Q9UPC5 381 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 TRIM33Q9UPN9 1127 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 SLC8A2Q9UPR5 921 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 RAI2Q9Y5P3 530 aa7.97□□□□□ -1.13
SCARB2-220ENST00000640076 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SHISA7A6NL88 538 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 WASH3PC4AMC7 463 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 ALOX15BO15296 676 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 BNIP3LO60238 219 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 KDM1AO60341 852 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MAN1A2O60476 641 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SOCS5O75159 536 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 PRLP01236 227 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MSL3P1P0C860 447 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 OSMP13725 252 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 GKP32189 559 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 KIR2DL1P43626 348 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SESN2P58004 480 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 DCAF7P61962 342 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 CDK18Q07002 472 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 CDH17Q12864 832 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MRPL28Q13084 256 aaKnown RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 PON2Q15165 354 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SLC1A5Q15758 541 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 HNRNPA1L2Q32P51 320 aaKnown RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 PPM1JQ5JR12 505 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 EMC10Q5UCC4 262 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 FSTL4Q6MZW2 842 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SERPINA13PQ6UXR4 307 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 HEATR4Q86WZ0 1026 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 CAMK1DQ8IU85 385 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MPP5Q8N3R9 675 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 RYBPQ8N488 228 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MREGQ8N565 214 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 ZNF366Q8N895 744 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 DNAAF3Q8N9W5 541 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 APIPQ96GX9 242 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MSANTD3Q96H12 275 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 ZC3H10Q96K80 434 aaKnown RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SIGLEC10Q96LC7 697 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 MTG2Q9H4K7 406 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 ATP13A3Q9H7F0 1226 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 KCTD5Q9NXV2 234 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 NSMCE4AQ9NXX6 385 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 NFKBIL1Q9UBC1 381 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-220ENST00000640076 CHKBQ9Y259 395 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 SNX13Q9Y5W8 968 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 TEX264Q9Y6I9 313 aa7.96□□□□□ -1.14
SCARB2-220ENST00000640076 CKAP5Q14008 2032 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SDR42E2A6NKP2 422 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 AP3B1O00203 1094 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TRAFD1O14545 582 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms