RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PIGRP01833 764 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 CAPN1P07384 714 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 PVRP15151 417 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 CALRP27797 417 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 PDIA3P30101 505 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 LIFRP42702 1097 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 MAZP56270 477 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 ARG2P78540 354 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 CYP27A1Q02318 531 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 AP1B1Q10567 949 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 RAPSNQ13702 412 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 CYP2A13Q16696 494 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 BEAN1Q3B7T3 259 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 COBLL1Q53SF7 1204 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 JADE1Q6IE81 842 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 FAM198BQ6UWH4 519 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 STRADAQ7RTN6 431 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 DYMQ7RTS9 669 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 SIAH3Q8IW03 269 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 TP53I13Q8NBR0 393 aaPredicted RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 PPHLN1Q8NEY8 458 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 GATAD1Q8WUU5 269 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 SLC38A3Q99624 504 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 NTPCRQ9BSD7 190 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 TCF7L1Q9HCS4 588 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 TUFT1Q9NNX1 390 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 FBXO2Q9UK22 296 aaPredicted RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 RCAN3Q9UKA8 241 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 ITGA11Q9UKX5 1188 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 SARDHQ9UL12 918 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.86
CCDC7-213ENST00000639290 SCN1AP35498 2009 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 TRBV23-1A0A0A0MS06 115 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 M0QZ24 198 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 CLIC2O15247 247 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 PAGE1O75459 146 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 STATHP02808 62 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 COL6A2P12110 1019 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 ADRB3P13945 408 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 SERPINB3P29508 390 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 GNL1P36915 607 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 POLD2P49005 469 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 GEMIN4P57678 1058 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 ALDH6A1Q02252 535 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 ILF3Q12906 894 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 VEZF1Q14119 521 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 FAM133BQ5BKY9 247 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 FAM120AOSQ5T036 256 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 FAM166AQ6J272 317 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 MMS22LQ6ZRQ5 1243 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC186Q7Z3E2 898 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 RALYLQ86SE5 291 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 CAND1Q86VP6 1230 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 MFN1Q8IWA4 741 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 SYT14Q8NB59 555 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 POGLUT1Q8NBL1 392 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 FAM98AQ8NCA5 519 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 ENOX1Q8TC92 643 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 DDB2Q92466 427 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 PPP1R14AQ96A00 147 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 SMARCD1Q96GM5 515 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 HSH2DQ96JZ2 352 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 RUFY1Q96T51 708 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 TTC1Q99614 292 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 CSNK1G1Q9HCP0 422 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 VPS18Q9P253 973 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 EPHA6Q9UF33 1036 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 MTRF1LQ9UGC7 380 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 CHORDC1Q9UHD1 332 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 EIF3LQ9Y262 564 aaKnown RBP3.4□□□□□ -1.87
CCDC7-213ENST00000639290 PCDHGB1Q9Y5G3 927 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 ZANQ9Y493 2812 aa3.4□□□□□ -1.87
CCDC7-213ENST00000639290 TRAV20A0A0B4J274 112 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 EDIL3O43854 480 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 FAM189A1O60320 539 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PPP1R3DO95685 299 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ONECUT2O95948 504 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF30P17039 623 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 NELFEP18615 380 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 ACAT1P24752 427 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 RORAP35398 523 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 DDIT3P35638 169 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 NEK4P51957 841 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 MTTPP55157 894 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TMPRSS15P98073 1019 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PCDH1Q08174 1060 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 NFKBIBQ15653 356 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 PFKFB3Q16875 520 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM249Q2WGJ8 235 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 MYLK3Q32MK0 819 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 RPS26P11Q5JNZ5 115 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 FAM209AQ5JX71 171 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 C10orf120Q5SQS8 335 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 RIPPLY2Q5TAB7 128 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 NKAIN2Q5VXU1 208 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TPH2Q8IWU9 490 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 CHERPQ8IWX8 916 aaKnown RBP3.39□□□□□ -1.87
CCDC7-213ENST00000639290 SCUBE1Q8IWY4 988 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 TEX29Q8N6K0 151 aa3.39□□□□□ -1.87
CCDC7-213ENST00000639290 GOLGA6L1Q8N7Z2 621 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms