RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 RHOJQ9H4E5 214 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 PRDM8Q9NQV8 689 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 POLR3BQ9NW08 1133 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 GTSE1Q9NYZ3 720 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 GLTPQ9NZD2 209 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 RCOR3Q9P2K3 495 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 TRMT6Q9UJA5 497 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 DOCK5Q9H7D0 1870 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SBF1O95248 1867 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ZCWPW2A0A1B0GU75 182 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ERI2A8K979 691 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 PRLP01236 227 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 PDGFAP04085 211 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 RBP1P09455 135 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 RAP2AP10114 183 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ITGAMP11215 1152 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 IL12RB1P42701 662 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 CBX5P45973 191 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 GLUD2P49448 558 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 FCGRTP55899 365 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 NFIAQ12857 509 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 UGP2Q16851 508 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 AAK1Q2M2I8 961 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF470Q6ECI4 717 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 DENND5AQ6IQ26 1287 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 METTL2BQ6P1Q9 378 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ZPBP2Q6X784 338 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 DPY19L3Q6ZPD9 716 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 STK32CQ86UX6 486 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 HID1Q8IV36 788 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SYTL1Q8IYJ3 562 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 CENPLQ8N0S6 344 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 DNERQ8NFT8 737 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 FCGR1BQ92637 280 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SLC38A4Q969I6 547 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 GPR78Q96P69 363 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 TRMOQ9BU70 441 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 OSBPL2Q9H1P3 480 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 MAT2BQ9NZL9 334 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 XPR1Q9UBH6 696 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 KLHL21Q9UJP4 597 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SNX7Q9UNH6 387 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 MYO18AQ92614 2054 aaKnown RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 LOC100130705A0A1B0GUX0 176 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 MEIOCA2RUB1 952 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 H3BQ06 376 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CST3P01034 146 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 PSAPP07602 524 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 SLC35E2BP0CK96 405 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 MTHFD1P11586 935 aaKnown RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CCNCP24863 283 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 FMO4P31512 558 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 HNF4AP41235 474 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 MASP1P48740 699 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 NKX3-2P78367 333 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 KCNAB2Q13303 367 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 MFSD13AQ14CX5 517 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CA9Q16790 459 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CCDC190Q86UF4 302 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 DCP1BQ8IZD4 617 aaKnown RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CERS5Q8N5B7 392 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF669Q96BR6 464 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 OR2A14Q96R47 310 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CDADC1Q9BWV3 514 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 BFARQ9NZS9 450 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 MAGEL2Q9UJ55 1249 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 FEM1BQ9UK73 627 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 TBC1D24Q9ULP9 559 aa11.9□□□□□ -0.5
CAPN3-221ENST00000638141 RUVBL2Q9Y230 463 aaKnown RBP11.9□□□□□ -0.5
CAPN3-221ENST00000638141 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 PTGES3LE9PB15 166 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 G3V2T6 193 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 MICAL2O94851 1124 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 LRIG2O94898 1065 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 CAPN3P20807 821 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 BDNFP23560 247 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 PIGAP37287 484 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 NPY2RP49146 381 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 GZMKP49863 264 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 MAP3K7CLP57077 242 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 PTPN11Q06124 597 aaPredicted RBP11.9□□□□□ -0.51
CAPN3-221ENST00000638141 POU5F1BQ06416 359 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 BCL7AQ4VC05 210 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 SHEQ5VZ18 495 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 FAM35AQ86V20 835 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.51
CAPN3-221ENST00000638141 TP53I13Q8NBR0 393 aaPredicted RBP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms