RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	PIM3	Q86V86	326 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	NKAP	Q8N5F7	415 aa	Known RBP	11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	RDH11	Q8TC12	318 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	KCTD4	Q8WVF5	259 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	ASB12	Q8WXK4	309 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	INPP5D	Q92835	1189 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	SCYL1	Q96KG9	808 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	GPR21	Q99679	349 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	OSBPL6	Q9BZF3	934 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	IGSF5	Q9NSI5	407 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	ZNF358	Q9NW07	568 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	KLHL42	Q9P2K6	505 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	GALP	Q9UBC7	116 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	TRMT6	Q9UJA5	497 aa	Known RBP	11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	MID2	Q9UJV3	735 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	CNOT6	Q9ULM6	557 aa	Known RBP	11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	ZFR2	Q9UPR6	939 aa	Known RBP	11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	MED16	Q9Y2X0	877 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	PRSS21	Q9Y6M0	314 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	UNC80	Q8N2C7	3258 aa		11.64	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3D	A0A087WVF3	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3I	A0A087WXS9	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3E	A0A087X179	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3K	A0A087X1G2	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	GMNC	A6NCL1	334 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3L	B9A6J9	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	QSOX1	O00391	747 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	DNAJC6	O75061	913 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	SOD1	P00441	154 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	BPGM	P07738	259 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	RBP1	P09455	135 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3H	P0C7X1	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CPA3	P15088	417 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TEAD1	P28347	426 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	AKT1	P31749	480 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TPMT	P51580	245 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CLCN7	P51798	805 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	ADPRH	P54922	357 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	IL2	P60568	153 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CSHL1	Q14406	222 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TMEM259	Q4ZIN3	620 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3G	Q6DHY5	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	RAET1G	Q6H3X3	334 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3C	Q6IPX1	549 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	LRRC8E	Q6NSJ5	796 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PNCK	Q6P2M8	343 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PAQR3	Q6TCH7	311 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	ADAMTSL4	Q6UY14	1074 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	HORMAD1	Q86X24	394 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PHYKPL	Q8IUZ5	450 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	NUDCD3	Q8IVD9	361 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM42	Q8IWZ5	723 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PGBD3	Q8N328	593 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CLDN19	Q8N6F1	224 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CCDC63	Q8NA47	563 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	FLCN	Q8NFG4	579 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	ANKRD49	Q8WVL7	239 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	HMGB4	Q8WW32	186 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CLDN23	Q96B33	292 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	CCDC97	Q96F63	343 aa	Predicted RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PDLIM5	Q96HC4	596 aa	Known RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	HIC2	Q96JB3	615 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	ASB2	Q96Q27	587 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	PANX3	Q96QZ0	392 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	MRPL57	Q9BQC6	102 aa	Known RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	TSSK1B	Q9BXA7	367 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	C1QTNF7	Q9BXJ2	289 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	SLC17A9	Q9BYT1	436 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	EPN3	Q9H201	632 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	EPHX3	Q9H6B9	360 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	SGK2	Q9HBY8	427 aa		11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.63	□□□□□ -0.55
CLN6-223	ENST00000637823	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823		A0A1W2PQU0	124 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	CCDC189	A1A4V9	331 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	LRRC72	A6NJI9	287 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	IQCF5	A8MTL0	148 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823		K7ESM1	405 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	STK25	O00506	426 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	KPNA5	O15131	536 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	MAGEC1	O60732	1142 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM16	O95361	564 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	IGLV3-19	P01714	112 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	NEFH	P12036	1026 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	ZNF37A	P17032	561 aa	Predicted RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	ATP6V0D1	P61421	351 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TMEM115	Q12893	351 aa	Predicted RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	WSCD2	Q2TBF2	565 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	SEL1L3	Q68CR1	1132 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	RGS9BP	Q6ZS82	235 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM67	Q6ZTA4	783 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	FAM124A	Q86V42	546 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	FSTL5	Q8N475	847 aa	Predicted RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TMEM151A	Q8N4L1	468 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	SIDT2	Q8NBJ9	832 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	OR2T34	Q8NGX1	318 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	RAB3IL1	Q8TBN0	382 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	CD200R1	Q8TD46	325 aa		11.62	□□□□□ -0.55

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