RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ASIC3Q9UHC3 531 aa3□□□□□ -1.93
VIM-210ENST00000637053 TRMT6Q9UJA5 497 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 AJAP1Q9UKB5 411 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 GMEB2Q9UKD1 530 aa3□□□□□ -1.93
VIM-210ENST00000637053 PCDHA7Q9UN72 937 aa3□□□□□ -1.93
VIM-210ENST00000637053 PCDHA6Q9UN73 950 aa3□□□□□ -1.93
VIM-210ENST00000637053 CDC14AQ9UNH5 594 aa3□□□□□ -1.93
VIM-210ENST00000637053 PLEKHA6Q9Y2H5 1048 aa3□□□□□ -1.93
VIM-210ENST00000637053 MRPS7Q9Y2R9 242 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 PCDHA3Q9Y5H8 950 aa3□□□□□ -1.93
VIM-210ENST00000637053 SRPRBQ9Y5M8 271 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 USP16Q9Y5T5 823 aa3□□□□□ -1.93
VIM-210ENST00000637053 LIPGQ9Y5X9 500 aa3□□□□□ -1.93
VIM-210ENST00000637053 DYNC1LI1Q9Y6G9 523 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 STON1Q9Y6Q2 735 aa3□□□□□ -1.93
VIM-210ENST00000637053 A0A0A6YYJ9 748 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 A0A0U1RQS6 177 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 FAM237BA0A1B0GVD1 139 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TCRBV21S2A2A0A5A6 115 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 OR2A25A4D2G3 310 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 BTBD17A6NE02 478 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TMEM247A6NEH6 219 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LRRC53A6NM62 1247 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 A8MZ25 164 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KDM4EB2RXH2 506 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 SUPT3HB4E1H0 165 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KCNJ18B7U540 433 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 BTBD19C9JJ37 291 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SLCO1B7G3V0H7 640 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CCDC188H7C350 402 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PEX12O00623 359 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 FPGTO14772 594 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SYN3O14994 580 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 POLR1CO15160 346 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 SEPT4O43236 478 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ARHGEF9O43307 516 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ATP8B1O43520 1251 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KCNQ3O43525 872 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TBX19O60806 448 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TOM1L1O75674 476 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RHOBTB1O94844 696 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PIGNO95427 931 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LCA5LO95447 670 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 IFNA14P01570 189 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CLTAP09496 248 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZNF888P0CJ79 500 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 CALM1P0DP23 149 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CALM2P0DP24 149 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CALM3P0DP25 149 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 AREGP15514 252 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 NAGAP17050 411 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 EGR1P18146 543 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 FUT1P19526 365 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PTNP21246 168 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 S100A1P23297 94 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ACP1P24666 158 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CD27P26842 260 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 YWHAQP27348 245 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ALDH3A1P30838 453 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 MSX2P35548 267 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 SOAT1P35610 550 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ATP5C1P36542 298 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 GPR4P46093 362 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KCNJ1P48048 391 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 FLT3LGP49771 235 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SLC26A2P50443 739 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SLC7A2P52569 658 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ARFIP2P53365 341 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 P2RX3P56373 397 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SELENOVP59797 346 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ST8SIA6P61647 398 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PSMC5P62195 406 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 CBX1P83916 185 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SP2Q02086 613 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PTH1RQ03431 593 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 SMARCB1Q12824 385 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TMEM115Q12893 351 aaPredicted RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 MALLQ13021 153 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 OLIG2Q13516 323 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 DYRK1AQ13627 763 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 KCNJ12Q14500 433 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ANGPT1Q15389 498 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ALX1Q15699 326 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TAZQ16635 292 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PARP6Q2NL67 630 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 HNRNPA1L2Q32P51 320 aaKnown RBP2.99□□□□□ -1.93
VIM-210ENST00000637053 EPC2Q52LR7 807 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 HIKESHIQ53FT3 197 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ZNF311Q5JNZ3 666 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PAGE2BQ5JRK9 111 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 TMEM31Q5JXX7 168 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 GCNT6Q5T4J0 391 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 AGBL2Q5U5Z8 902 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LCN1P1Q5VSP4 162 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 ARHGEF16Q5VV41 709 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 LIPMQ5VYY2 423 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 RAP1GAP2Q684P5 730 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 WBP2NLQ6ICG8 309 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 OR6B2Q6IFH4 312 aa2.99□□□□□ -1.93
VIM-210ENST00000637053 PCSK4Q6UW60 755 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms