RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 DUSP10Q9Y6W6 482 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 FRMPD4Q14CM0 1322 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PREX2Q70Z35 1606 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 KIF20BQ96Q89 1820 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 APOC4-APOC2K7ER74 178 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SCDO00767 359 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MUSKO15146 869 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 APOC2P02655 101 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF3P17036 446 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MAP3K8P41279 467 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 AKR1D1P51857 326 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 HEPACAMQ14CZ8 416 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CHADLQ6NUI6 762 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SLC30A8Q8IWU4 369 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TNS4Q8IZW8 715 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 C2orf73Q8N5S3 287 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 XAGE5Q8WWM1 108 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 WRAP53Q9BUR4 548 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RAB11FIP5Q9BXF6 653 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM168Q9H0V1 697 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM134Q9H6X4 195 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MRPL42Q9Y6G3 142 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PLOD2O00469 737 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PPEF2O14830 753 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TM7SF2O76062 418 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TFEBP19484 476 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 STOMP27105 288 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OR1D2P34982 312 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CTSKP43235 329 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 IRAK1P51617 712 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 DRG2P55039 364 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CDKL4Q5MAI5 379 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 NAIF1Q69YI7 327 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SLC8B1Q6J4K2 584 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RGMBQ6NW40 437 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 C3orf33Q6P1S2 294 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ERICH5Q6P6B1 374 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CPT1CQ8TCG5 803 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF471Q9BX82 626 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CXorf56Q9H5V9 222 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MRM3Q9HC36 420 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 KCNK4Q9NYG8 393 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 IFT80Q9P2H3 777 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CFL2Q9Y281 166 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TMA7Q9Y2S6 64 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ADAM18Q9Y3Q7 739 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 GLYATL1P3A0A0U1RQE8 302 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CPED1A4D0V7 1026 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 BHMG1C9JSJ3 638 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ADM5C9JUS6 153 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CLDN11O75508 207 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 IFNA21P01568 189 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ALOX5P09917 674 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LINGO3P0C6S8 592 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PTPN2P17706 415 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RPL22P35268 128 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 GRIA4P48058 902 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TXNL4AP83876 142 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CCZ1BP86790 482 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CCZ1P86791 482 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PLP2Q04941 152 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ZIK1Q3SY52 487 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PARP15Q460N3 678 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 BRMS1LQ5PSV4 323 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FNBP1LQ5T0N5 605 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LIPMQ5VYY2 423 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 WDR93Q6P2C0 686 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MED27Q6P2C8 311 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FAM35AQ86V20 835 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PLA2G15Q8NCC3 412 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MTMR8Q96EF0 704 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CERS2Q96G23 380 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ART5Q96L15 291 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 HSFY1Q96LI6 401 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ATG10Q9H0Y0 220 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MRPS30Q9NP92 439 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CNOT6Q9ULM6 557 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PCDHGA6Q9Y5G7 932 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 HSPA12AO43301 675 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SASH3O75995 380 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 IL7RP16871 459 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CXCR1P25024 350 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SPAM1P38567 509 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 WASP42768 502 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FKBP1BP68106 108 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 DPYSL3Q14195 570 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FASTKD3Q14CZ7 662 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LDLRAP1Q5SW96 308 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM63BQ5T3F8 832 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MON1AQ86VX9 555 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CEP97Q8IW35 865 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OXR1Q8N573 874 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TTLQ8NG68 377 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OR4K17Q8NGC6 315 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OR52K1Q8NGK4 314 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OR4C15Q8NGM1 316 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms