RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LRRFIP2Q9Y608 721 aaKnown RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 A3GALT2U3KPV4 340 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC144AA2RUR9 1427 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 SPATA31E1Q6ZUB1 1445 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 SSH2Q76I76 1423 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 YTHDC2Q9H6S0 1430 aaKnown RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 DOCK3Q8IZD9 2030 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 ADGRF5Q8IZF2 1346 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 LCTP09848 1927 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 BAZ2AQ9UIF9 1905 aaKnown RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 CACNA1FO60840 1977 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SIP14410 1827 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 KCPQ6ZWJ8 1503 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ANKRD30AQ9BXX3 1397 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TANC1Q9C0D5 1861 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 DUOX1Q9NRD9 1551 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 DISP2A7MBM2 1401 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CPSF1Q10570 1443 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 IGLV5-37A0A075B6J1 123 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 IGLV5-52A0A0A0MRZ9 124 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 A0A1W2PPH5 198 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM202A6NGA9 273 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 GAGE10A6NGK3 116 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 USP17L23D6RBM5 183 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NPIPB11E5RHQ5 1161 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TULP2O00295 520 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 EBAG9O00559 213 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPA12AO43301 675 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TOM1O60784 492 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CRLF1O75462 422 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC22A3O75751 556 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SEC31AO94979 1220 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NKX2-2O95096 273 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 RTN3O95197 1032 aaPredicted RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CLDN14O95500 239 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CAVIN2O95810 425 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 EGFP01133 1207 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CRYAAP02489 173 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 AMBPP02760 352 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TFP02787 698 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 MMP2P08253 660 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CYC1P08574 325 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPA1AP0DMV8 641 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPA1BP0DMV9 641 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 UBL4AP11441 157 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CETPP11597 493 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ITGAXP20702 1163 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 GPTP24298 496 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 BDKRB2P30411 391 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ELF1P32519 619 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ABCD1P33897 745 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TTKP33981 857 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 RYKP34925 604 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 DDIT3P35638 169 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TMPOP42166 694 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 PIK3CAP42336 1068 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 FMO5P49326 533 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CENPAP49450 140 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CSRP3P50461 194 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CCR9P51686 369 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CLCN3P51790 818 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CASP6P55212 293 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 EIF3BP55884 814 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 FOXM1Q08050 763 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CDC16Q13042 620 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TNFAIP1Q13829 316 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NAB2Q15742 525 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ATP13A5Q4VNC0 1218 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 KCNT1Q5JUK3 1230 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 JAKMIP3Q5VZ66 844 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NAA35Q5VZE5 725 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 GGNBP1Q5YKI7 109 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 HAUS3Q68CZ6 603 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 PLA2G4FQ68DD2 849 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SIGIRRQ6IA17 410 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ACAD10Q6JQN1 1059 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC70Q6NSX1 233 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 METTL2BQ6P1Q9 378 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 DUS1LQ6P1R4 473 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 C17orf99Q6UX52 265 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 UNQ6126/PRO20091Q6UXV3 157 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 CCNI2Q6ZMN8 369 aaPredicted RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 KRTAP5-5Q701N2 237 aaPredicted RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 MARK2Q7KZI7 788 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TAOK1Q7L7X3 1001 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 R3HCC1LQ7Z5L2 792 aaKnown RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC9B2Q86UD5 537 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 GPR180Q86V85 440 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ARMC8Q8IUR7 673 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC35F3Q8IY50 421 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NAGSQ8N159 534 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 FRMD1Q8N878 549 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 AGBL3Q8NEM8 1001 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 BEST2Q8NFU1 509 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 OR14L1PQ8NHC6 308 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 NFKBIDQ8NI38 313 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM163Q8TC26 289 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM170AQ8WVE7 144 aa1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ZKSCAN4Q969J2 545 aaPredicted RBP1.1□□□□□ -2.23
SMARCB1-209ENST00000635578 ORAI1Q96D31 301 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms