RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MIGA1Q8NAN2 632 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TMEM116Q8NCL8 245 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SDR42E1Q8WUS8 393 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ZFPM2Q8WW38 1151 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 POMGNT1Q8WZA1 660 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 BADQ92934 168 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 FAM149B1Q96BN6 582 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 INTS12Q96CB8 462 aaKnown RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 ADAD1Q96M93 576 aaKnown RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 FRG2BQ96QU4 278 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SIGLEC11Q96RL6 698 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SLC32A1Q9H598 525 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ENTPD7Q9NQZ7 604 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ATP8A2Q9NTI2 1148 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ZBTB40Q9NUA8 1239 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 C20orf141Q9NUB4 165 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 POT1Q9NUX5 634 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ARL8BQ9NVJ2 186 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.57□□□□□ -2
SMARCB1-208ENST00000634926 NCKIPSDQ9NZQ3 722 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ZNF215Q9UL58 517 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 CORO1CQ9ULV4 474 aaPredicted RBP2.57□□□□□ -2
SMARCB1-208ENST00000634926 DHDHQ9UQ10 334 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 TMEM5Q9Y2B1 443 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 SNX8Q9Y5X2 465 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 GRIN2DO15399 1336 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 ZNF532Q9HCE3 1301 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 CACNA1HO95180 2353 aa2.57□□□□□ -2
SMARCB1-208ENST00000634926 KIAA1671Q9BY89 1806 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 NLRC5Q86WI3 1866 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 KMT2EQ8IZD2 1858 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 MYO9BQ13459 2157 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 FAM237BA0A1B0GVD1 139 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 A0A1W2PQF6 199 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 TCRBV7S3A2A0A539 114 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ARHGAP10A1A4S6 786 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 FRMD3A2A2Y4 597 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 EME2A4GXA9 379 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 PABPN1LA6NDY0 278 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 TTC36A6NLP5 189 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 MYO1GB0I1T2 1018 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 B4DGG1 531 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 KBTBD13C9JR72 458 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 RRHO14718 337 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 BCAT2O15382 392 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 P4HA2O15460 535 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PRKAB2O43741 272 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 DUSP11O75319 330 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 TACC1O75410 805 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 IDH1O75874 414 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 PGM3O95394 542 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CBX6O95503 412 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 DDAH2O95865 285 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 NDUFB10O96000 172 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PGK1P00558 417 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PLGP00747 810 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 TIMP1P01033 207 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 HEXAP06865 529 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PGK2P07205 417 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CHRM5P08912 532 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 NR2F1P10589 423 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 RARGP13631 454 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 EEF2P13639 858 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 FOSL2P15408 326 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CD72P21854 359 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 TNFRSF8P28908 595 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ACSL1P33121 698 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 COPB2P35606 906 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PBX3P40426 434 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PTPN9P43378 593 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 GABRB2P47870 512 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ACLYP53396 1101 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ZNF91Q05481 1191 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ZNF268Q14587 947 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 CRYMQ14894 314 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 C5orf22Q49AR2 442 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 SBK1Q52WX2 424 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CCDC158Q5M9N0 1113 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 PRAMEF19Q5SWL8 479 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 SERTAD4-AS1Q5TG53 156 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 FAM171A1Q5VUB5 890 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 TTI2Q6NXR4 508 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 TMEM154Q6P9G4 183 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CTR9Q6PD62 1173 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 KLHL35Q6PF15 583 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 SERPINA13PQ6UXR4 307 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ZNF813Q6ZN06 617 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 RBM44Q6ZP01 1051 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 PRPF39Q86UA1 669 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 FAM160B2Q86V87 743 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 ARHGAP12Q8IWW6 846 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 SRBD1Q8N5C6 995 aaKnown RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 FRMD1Q8N878 549 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 FAM133AQ8N9E0 248 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 GMCL1P1Q8NEA9 526 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 DNAAF1Q8NEP3 725 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 CADM4Q8NFZ8 388 aa2.56□□□□□ -2
SMARCB1-208ENST00000634926 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.56□□□□□ -2
SMARCB1-208ENST00000634926 ZNF398Q8TD17 642 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms