RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 UFD1Q92890 307 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 MYO19Q96H55 970 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 FERD3LQ96RJ6 166 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 DUSP10Q9Y6W6 482 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 NOL4O94818 638 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 SRCP12931 536 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 AMPD1P23109 780 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CDKAL1Q5VV42 579 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 PNPT1Q8TCS8 783 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 MRPS23Q9Y3D9 190 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF806P0C7X5 589 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 SSTR1P30872 391 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CASRP41180 1078 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 DDR1Q08345 913 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.312e-7■■■■□ 22.3
SYNGAP1-208ENST00000629380 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 C11orf65Q8NCR3 313 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 RIOX1Q9H6W3 641 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 TRPM6Q9BX84 2022 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 TBL1XO60907 577 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 TROAPQ12815 778 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 OR2T12Q8NG77 320 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 UBAP2LQ14157 1087 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPR107Q5VW38 600 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 USP43Q70EL4 1123 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 SEMA6BQ9H3T3 888 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 NINJ2Q9NZG7 142 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ADGRE2Q9UHX3 823 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 PER2O15055 1255 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 GLRA2P23416 452 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 M0R036 132 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZCCHC23Q6ZST2 131 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 GPR142Q7Z601 462 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 ZNF227Q86WZ6 799 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-208ENST00000629380 CAPN14A8MX76 684 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 CCKBRP32239 447 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 HNF4AP41235 474 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 CLCN7P51798 805 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 TXNL4AP83876 142 aaKnown RBP13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 SEZ6Q53EL9 994 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 COLEC12Q5KU26 742 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 NELFAQ9H3P2 528 aa13.08□□□□□ -0.31
SYNGAP1-208ENST00000629380 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TFEBP19484 476 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 ANKRD26P1Q6NSI1 321 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 OR52K1Q8NGK4 314 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 MARCH7Q9H992 704 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 THUMPD1Q9NXG2 353 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 AGO1Q9UL18 857 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 VSTM5A8MXK1 200 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 DNTTP04053 509 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 SHMT1P34896 483 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 POLR2JP52435 117 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TSPAN5P62079 268 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TBATAQ96M53 351 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 C14orf166Q9Y224 244 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 PRAMEF33A0A0G2JMD5 474 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 PRAMEF10O60809 474 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 CTNNB1P35222 781 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TMBIM6P55061 237 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC30A6Q6NXT4 461 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZNF350Q9GZX5 532 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 ATG2BQ96BY7 2078 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 FAM151BQ6UXP7 276 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 FARSBQ9NSD9 589 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 C22orf31O95567 290 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 CAV3P56539 151 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 TAPBPLQ9BX59 468 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 M0R129 80 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 KLHL22Q53GT1 634 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC5A5Q92911 643 aa13.08□□□□□ -0.32
SYNGAP1-208ENST00000629380 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms