RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DENND1BQ6P3S1 775 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ZNF354CQ86Y25 554 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RHOT1Q8IXI2 618 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ATP6V0D2Q8N8Y2 350 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 EXD1Q8NHP7 514 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PCDH19Q8TAB3 1148 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 GRK7Q8WTQ7 553 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CHTF18Q8WVB6 975 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RNF141Q8WVD5 230 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ATG4AQ8WYN0 398 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PPP1R14AQ96A00 147 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 Q96M66 194 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PRORYQ9H606 182 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CYTH4Q9UIA0 394 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 FZD4Q9ULV1 537 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SNX10Q9Y5X0 201 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ST14Q9Y5Y6 855 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SCINQ9Y6U3 715 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RGS16O15492 202 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 KIAA0754O94854 1291 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LSM8O95777 96 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LATS1O95835 1130 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 FYNP06241 537 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 C1SP09871 688 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ALPPL2P10696 532 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RBMS1P29558 406 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CDH5P33151 784 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CCR5P51681 352 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 YWHAZP63104 245 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 NFATC3Q12968 1075 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PPP1R7Q15435 360 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CNGA2Q16280 664 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CCNG2Q16589 344 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LACTB2Q53H82 288 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ODF2Q5BJF6 829 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LRRC73Q5JTD7 316 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RABGAP1LQ5R372 815 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 FBXL22Q6P050 247 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MSANTD2Q6P1R3 559 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 FAM214BQ7L5A3 538 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ERICH1Q86X53 443 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PAF1Q8N7H5 531 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 OR52K2Q8NGK3 314 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 USP7Q93009 1102 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CHMP6Q96FZ7 201 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 BTN2A3PQ96KV6 586 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SERPINB12Q96P63 405 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 C11orf70Q9BRQ4 267 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 TM6SF2Q9BZW4 377 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 STMN4Q9H169 189 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MRPL47Q9HD33 250 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 HOMER3Q9NSC5 361 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 EURLQ9NYK6 297 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 GULP1Q9UBP9 304 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 STOML2Q9UJZ1 356 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 COQ6Q9Y2Z9 468 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MYLKQ15746 1914 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PMS2P1A4D2B8 440 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 TCAF2A6NFQ2 919 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 TMEM191CA6NGB0 347 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CYSRT1A8MQ03 144 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 KCNU1A8MYU2 1149 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PRAMEF26H0Y7S4 382 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RASGRF2O14827 1237 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 YKT6O15498 198 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 PAPSS1O43252 624 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 GAS8O95995 478 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SRPRAP08240 638 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SNRPB2P08579 225 aaKnown RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 AKT2P31751 481 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ITGA8P53708 1063 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ACTN3Q08043 901 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CALCOCO2Q13137 446 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 C2CD6Q53TS8 623 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LRRC38Q5VT99 294 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 AGBL4Q5VU57 503 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 DRICH1Q6PGQ1 229 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 Q6ZSR6 202 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 EXOC3L1Q86VI1 746 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 DEFB106AQ8N104 65 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 OXR1Q8N573 874 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 OTUD6BQ8N6M0 293 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 NETO2Q8NC67 525 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 CHST14Q8NCH0 376 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LMX1AQ8TE12 382 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 P3H4Q92791 437 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ATXN7L3BQ96GX2 97 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 HSFY1Q96LI6 401 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 APOLD1Q96LR9 279 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 IL12RB2Q99665 862 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 OSBPL8Q9BZF1 889 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 SUDS3Q9H7L9 328 aaPredicted RBP4.85□□□□□ -1.63
LINC00550-201ENST00000629293 POPDC2Q9HBU9 364 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 THSD1Q9NS62 852 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 MPP6Q9NZW5 540 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 ADAM22Q9P0K1 906 aa4.85□□□□□ -1.63
LINC00550-201ENST00000629293 LGALS13Q9UHV8 139 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms