RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 GHITMQ9H3K2 345 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 SLC2A6Q9UGQ3 507 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ACOT9Q9Y305 439 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CCL15-CCL14A0A0B4J2E2 113 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TARM1B6A8C7 271 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 H0YC42 278 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 F9P00740 461 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 HTR2BP41595 481 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 DPP6P42658 865 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PSEN2P49810 448 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 TMBIM6P55061 237 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 CEACAM7Q14002 265 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CCL15Q16663 113 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PIGGQ5H8A4 983 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PCID2Q5JVF3 399 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 ZFP1Q6P2D0 407 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 HTRA1Q92743 480 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 ZNF419Q96HQ0 510 aaPredicted RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 GPR78Q96P69 363 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CSF3RQ99062 836 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 GAD1Q99259 594 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TBL1YQ9BQ87 522 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 ZNF385DQ9H6B1 395 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 ZNF408Q9H9D4 720 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 MRPL39Q9NYK5 338 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 SBF1O95248 1867 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TRAV6A0A075B6T7 132 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 LRRC72A6NJI9 287 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 FAM155AB1AL88 458 aaPredicted RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 YKT6O15498 198 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 NOL3O60936 208 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 OR7A10O76100 309 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 MYL3P08590 195 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CYP2C18P33260 490 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 LEPRP48357 1165 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 BEX3Q00994 111 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 SLC13A2Q13183 592 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 MAPK11Q15759 364 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 C5orf22Q49AR2 442 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 Q5BKY6 102 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TSTD2Q5T7W7 516 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PM20D1Q6GTS8 502 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PIWIL3Q7Z3Z3 882 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 HID1Q8IV36 788 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 GALNT12Q8IXK2 581 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 NPAS2Q99743 824 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TRIM15Q9C019 465 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 MIOSQ9NXC5 875 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 NSMCE4AQ9NXX6 385 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 GMEB2Q9UKD1 530 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 DIMT1Q9UNQ2 313 aaKnown RBP12.36□□□□□ -0.43
LITAF-221ENST00000622633 PLXNB2O15031 1838 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 TSC2P49815 1807 aa12.36□□□□□ -0.43
LITAF-221ENST00000622633 SHROOM3Q8TF72 1996 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 FAM95CA0A1B0GW59 222 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 SEMA3DO95025 777 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 LHX1P48742 406 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 ARHGDIAP52565 204 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 RAB10P61026 200 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 OCA2Q04671 838 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 SP140Q13342 867 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ART3Q13508 389 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PON2Q15165 354 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ZNF704Q6ZNC4 412 aaPredicted RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 PLEKHH3Q7Z736 793 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 OR6F1Q8NGZ6 308 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 LPPQ93052 612 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ZFYVE19Q96K21 471 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 EFHD1Q9BUP0 239 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 RAD21L1Q9H4I0 556 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 GPN2Q9H9Y4 310 aaPredicted RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 WDR41Q9HAD4 459 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 VTI1BQ9UEU0 232 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 VWA7Q9Y334 891 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 COPG1Q9Y678 874 aaKnown RBP12.35□□□□□ -0.43
LITAF-221ENST00000622633 NEMP2A6NFY4 417 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PSMD3O43242 534 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 PMPCBO75439 489 aa12.35□□□□□ -0.43
LITAF-221ENST00000622633 STMN1P16949 149 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms