RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TBCCQ15814 346 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 FNDC3BQ53EP0 1204 aaKnown RBP9.84□□□□□ -0.83
VTA1-205ENST00000620996 GRAMD4Q6IC98 578 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 UGT3A1Q6NUS8 523 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 FRMD7Q6ZUT3 714 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 C12orf40Q86WS4 652 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GPSM1Q86YR5 675 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 RBFAQ8N0V3 343 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 EFCAB3Q8N7B9 438 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SNX31Q8N9S9 440 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GPR26Q8NDV2 337 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 CD200R1Q8TD46 325 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 RSPRY1Q96DX4 576 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 EGFL8Q99944 293 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GNPTGQ9UJJ9 305 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 RPL26L1Q9UNX3 145 aaKnown RBP9.84□□□□□ -0.83
VTA1-205ENST00000620996 PLA2G4CQ9UP65 541 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 MED16Q9Y2X0 877 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 PRSS21Q9Y6M0 314 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 ENTPD5O75356 428 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 MTX2O75431 263 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 ATP5BP06576 529 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 HLA-EP13747 358 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 FSHRP23945 695 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 AGTR2P50052 363 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SESN3P58005 492 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ATP6V0D1P61421 351 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 HERVK_113P63132 956 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CCDC6Q16204 474 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 UNC50Q53HI1 259 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 FAM78AQ5JUQ0 283 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TPRG1Q6ZUI0 275 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KDM1BQ8NB78 822 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 PHC3Q8NDX5 983 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 OR2A12Q8NGT7 310 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CCDC124Q96CT7 223 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 CMTM5Q96DZ9 223 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KCNA7Q96RP8 456 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 HEPHQ9BQS7 1158 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ERVK-6Q9BXR3 956 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 DERL2Q9GZP9 239 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 GSTO2Q9H4Y5 243 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TFB2MQ9H5Q4 396 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 OCEL1Q9H607 264 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 POPDC3Q9HBV1 291 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TRAF6Q9Y4K3 522 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SYCE1LA8MT33 242 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KERAO60938 352 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CIB2O75838 187 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 FESP07332 822 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ALOX15P16050 662 aaPredicted RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 LHCGRP22888 699 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SLC6A11P48066 632 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CSNK1DP48730 415 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 NME5P56597 212 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 BTKQ06187 659 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KLF10Q13118 480 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CERS6Q6ZMG9 384 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SNX32Q86XE0 403 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TMPRSS6Q8IU80 811 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ZNF557Q8N988 423 aaPredicted RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 LKAAEAR1Q8TD35 194 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 AGAP11Q8TF27 550 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KIAA1191Q96A73 305 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SCRN2Q96FV2 425 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 LMLNQ96KR4 655 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 BTRCQ9Y297 605 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 OAS3Q9Y6K5 1087 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 CFLARO15519 480 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TULP3O75386 442 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ACRV1P26436 265 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 SUOXP51687 545 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 POLR2LP62875 67 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 ROR2Q01974 943 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 SETMARQ53H47 684 aaPredicted RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 MYO1HQ8N1T3 1032 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 CFAP61Q8NHU2 1237 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 BPIFB1Q8TDL5 484 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 KCNJ9Q92806 393 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 FGF13Q92913 245 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ATP6V1E2Q96A05 226 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 TUBGCP5Q96RT8 1024 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ATOH8Q96SQ7 321 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 PBX4Q9BYU1 374 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 EIF2B4Q9UI10 523 aaKnown RBP9.83□□□□□ -0.84
VTA1-205ENST00000620996 PTGDR2Q9Y5Y4 395 aa9.83□□□□□ -0.84
VTA1-205ENST00000620996 ALPK3Q96L96 1907 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 H7C0S8 307 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 UBFD1O14562 309 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 PDE5AO76074 875 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 COX4I1P13073 169 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 AOC1P19801 751 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 PIK3R1P27986 724 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 NUDT2P50583 147 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 ILF2Q12905 390 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 KPNB1Q14974 876 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 PPP1R3AQ16821 1122 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 ATP13A5Q4VNC0 1218 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms