RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 PDPRQ8NCN5 879 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PNPT1Q8TCS8 783 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 FAR1Q8WVX9 515 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ULK4Q96C45 1275 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 SLC47A1Q96FL8 570 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 MAELQ96JY0 434 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 FCRL2Q96LA5 508 aaPredicted RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 IGKV6D-21A0A0A0MT36 114 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 NPEPPSL1A6NEC2 478 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ARVCFO00192 962 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 RPL38P63173 70 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 GHRHRQ02643 423 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ZNF235Q14590 738 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 STON2Q8WXE9 905 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 UGT2B28Q9BY64 529 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 ATP13A3Q9H7F0 1226 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 EIF2B4Q9UI10 523 aaKnown RBP13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 GMPPBQ9Y5P6 360 aa13.14□□□□□ -0.31
CYFIP1-211ENST00000619348 F9P00740 461 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CRHBPP24387 322 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 PIGAP37287 484 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 GRIK4Q16099 956 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 UGT3A1Q6NUS8 523 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ISCA2Q86U28 154 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 PHACTR4Q8IZ21 702 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 OR13C4Q8NGS5 318 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 DEPDC7Q96QD5 511 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CITED4Q96RK1 184 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 TPK1Q9H3S4 243 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 MAGEE1Q9HCI5 957 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 VPS4AQ9UN37 437 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 PCDHGA11Q9Y5H2 935 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CENPFP49454 3210 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 A0A1B0GTL3 188 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 FAM155AB1AL88 458 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 CDC7O00311 574 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ACOX3O15254 700 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 IL12AP29459 219 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 UBE3AQ05086 875 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 PAQR3Q6TCH7 311 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 DTWD1Q8N5C7 304 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 MINDY1Q8N5J2 469 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 FAM86B1Q8N7N1 296 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 C2CD4AQ8NCU7 369 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 SCAMP5Q8TAC9 235 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ISL2Q96A47 359 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 VRTNQ9H8Y1 702 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 PARVBQ9HBI1 364 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 ARL5AQ9Y689 179 aa13.13□□□□□ -0.31
CYFIP1-211ENST00000619348 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 TARM1B6A8C7 271 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 FXYD1O00168 92 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 PAGE1O75459 146 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 BMP4P12644 408 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 HSD17B1P14061 328 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 CD36P16671 472 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 GRIK1P39086 918 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 IDH2P48735 452 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 LILRA4P59901 499 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 DNAJB13P59910 316 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 RAD51Q06609 339 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 ZRANB3Q5FWF4 1079 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 PLEKHG7Q6ZR37 379 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 DNAJB3Q8WWF6 145 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 SNX27Q96L92 541 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 SENP8Q96LD8 212 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 TRIM54Q9BYV2 358 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 TP63Q9H3D4 680 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 CAB39Q9Y376 341 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 I6L893 689 aaPredicted RBP13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 RAP2AP10114 183 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 ARNTP27540 789 aa13.12□□□□□ -0.31
CYFIP1-211ENST00000619348 DAOAP59103 153 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms