RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 A8MV72 311 aaPredicted RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 FBP2O00757 339 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 NRP2O60462 931 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GMDSO60547 372 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GCATO75600 419 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GPIP06744 558 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SPNP16150 400 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 TPI1P60174 286 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SLC18A2Q05940 514 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 LAPTM5Q13571 262 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 TRIM40Q6P9F5 258 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 VSIG10LQ86VR7 867 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GRAMD2AQ8IUY3 354 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SVOPLQ8N434 492 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 C7orf34Q96L11 122 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 ACOX2Q99424 681 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 ATP8B3O60423 1300 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 ZC3H3Q8IXZ2 948 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 FBXO30Q8TB52 745 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SKA2Q8WVK7 121 aaPredicted RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 MTFMTQ96DP5 389 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 SLC38A2Q96QD8 506 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 PRKD2Q9BZL6 878 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 CRISPLD1Q9H336 500 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 EXOSC4Q9NPD3 245 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 TLR9Q9NR96 1032 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SLC30A4O14863 429 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GLRA3O75311 464 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 DDNO94850 711 aaPredicted RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 NCS1P62166 190 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SPANXN3Q5MJ09 141 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 HSDL2Q6YN16 418 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 OR4A15Q8NGL6 344 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 ZNF607Q96SK3 696 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 SLC25A13Q9UJS0 675 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 OAS3Q9Y6K5 1087 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 PRKCGP05129 697 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 NAT2P11245 290 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 EIF4BP23588 611 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 PITPNBP48739 271 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 RARRES1P49788 294 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GMPSP49915 693 aaPredicted RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 NDST1P52848 882 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 HERC6Q8IVU3 1022 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 DDIASQ8IXT1 998 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 ZNF781Q8N8C0 355 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 HAVCR2Q8TDQ0 301 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 GATA6Q92908 595 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 KCNS3Q9BQ31 491 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 MRPL45Q9BRJ2 306 aaKnown RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 AP4B1Q9Y6B7 739 aa3.06□□□□□ -1.92
NEB-220ENST00000618972 KDM6AO15550 1401 aaPredicted RBP3.06□□□□□ -1.92
NEB-220ENST00000618972 BTN3A1O00481 513 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 HDAC3O15379 428 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GSRP00390 522 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SERPINA1P01009 418 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 WEE1P30291 646 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RNF144AP50876 292 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 CLCN3P51790 818 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 C1QTNF12Q5T7M4 302 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SYPL2Q5VXT5 272 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 ADAMTS13Q76LX8 1427 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 LACC1Q8IV20 430 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NDNFQ8TB73 568 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 AP2M1Q96CW1 435 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TBCBQ99426 244 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IL1RAPQ9NPH3 570 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 J3QR89 54 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SPARCP09486 303 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CNPP09543 421 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 CDKN2CP42773 168 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GRHL2Q6ISB3 625 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 METTL3Q86U44 580 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 UCKL1Q9NWZ5 548 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RPL36Q9Y3U8 105 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 NRXN1Q9ULB1 1477 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 E5RI56 91 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TGOLN2O43493 480 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CCR4P51679 360 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 KCT2Q8NC54 265 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 GLB1L3Q8NCI6 653 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 LRTOMTQ8WZ04 291 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 KCNN2Q9H2S1 579 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 MYPNQ86TC9 1320 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 A0A087X1B8 175 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 TMEM221A6NGB7 291 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 FAM220BPB1ANY3 271 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 USP2O75604 605 aaPredicted RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 C1QCP02747 245 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 RAB3AP20336 220 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 CAP2P40123 477 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 IRF9Q00978 393 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NIPAL4Q0D2K0 466 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 NME3Q13232 169 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 SYT16Q17RD7 645 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 R3HCC1LQ7Z5L2 792 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 ZCCHC9Q8N567 271 aaKnown RBP3.05□□□□□ -1.92
NEB-220ENST00000618972 REPS1Q96D71 796 aa3.05□□□□□ -1.92
NEB-220ENST00000618972 PPP1R10Q96QC0 940 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms