RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 WDR54Q9H977 334 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 MRM3Q9HC36 420 aaKnown RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 DNAI1Q9UI46 699 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SNX7Q9UNH6 387 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 H3BMH7 237 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 K7ELQ4 463 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 KRT86O43790 486 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 SCRG1O75711 98 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 GRAP2O75791 330 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CALCAP01258 141 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CYC1P08574 325 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CA4P22748 312 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MPSTP25325 297 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 RGRP47804 291 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CDK18Q07002 472 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MFAP5Q13361 173 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 LBRQ14739 615 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 ASIC2Q16515 512 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PLA2G4EQ3MJ16 856 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 YOD1Q5VVQ6 348 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 FAM131BQ86XD5 332 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PHF13Q86YI8 300 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 GALNT16Q8N428 558 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 NANOS1Q8WY41 292 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 CFAP57Q96MR6 1250 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PLEKHG4BQ96PX9 1271 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 WDR24Q96S15 920 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 C19orf43Q9BQ61 176 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PITPNM3Q9BZ71 974 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 FGF21Q9NSA1 209 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PCMTD2Q9NV79 361 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ZNF624Q9P2J8 865 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 LNPEPQ9UIQ6 1025 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 HOOK1Q9UJC3 728 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 OSGIN2Q9Y236 505 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNCA-213ENST00000618500 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ITPR2Q14571 2701 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 A0A0J9YYE9 177 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NPIPB15A6NHN6 443 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 A8MU76 341 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TRBC1P01850 177 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CD99P14209 185 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 FOLR1P15328 257 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 GPD1P21695 349 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 SOX11P35716 441 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ETV3P41162 512 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 POLD2P49005 469 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ZNF143P52747 638 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 SMSP52788 366 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 SH3BP2P78314 561 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NFATC2Q13469 925 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ATP1A4Q13733 1029 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PRAMEF13Q5VWM6 474 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 RWDD4Q6NW29 188 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 FAM180AQ6UWF9 173 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TRAM1L1Q8N609 369 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CCDC185Q8N715 623 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CLEC1AQ8NC01 280 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 AP2M1Q96CW1 435 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 SPATA32Q96LK8 384 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NSMCE3Q96MG7 304 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TGM7Q96PF1 710 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NUP85Q9BW27 656 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 KIAA1468Q9P260 1216 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 LRRK2Q5S007 2527 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 LRBAP50851 2863 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 APCP25054 2843 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 FAM171A2A8MVW0 826 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 C9J4A7 227 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MEN1O00255 615 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ZG16O60844 167 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 KLF7O75840 302 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 MTA2O94776 668 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 CLDN14O95500 239 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 VIPP01282 170 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 DRD2P14416 443 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PON1P27169 355 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NDUFS1P28331 727 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PAPOLAP51003 745 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 AP2B1P63010 937 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 PTSQ03393 145 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 DPYSQ14117 519 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TLR1Q15399 786 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ZNF569Q5MCW4 686 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MRPL14Q6P1L8 145 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 FMR1NBQ8N0W7 255 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 BBS5Q8N3I7 341 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 OR2Y1Q8NGV0 311 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 GRHL3Q8TE85 626 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 DENND1AQ8TEH3 1009 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 RXFP2Q8WXD0 754 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MAML1Q92585 1016 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 MTFMTQ96DP5 389 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 RUFY1Q96T51 708 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 ZSCAN5AQ9BUG6 496 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 TRIM39Q9HCM9 518 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms