RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ENPP3O14638 875 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 BCKDKO14874 412 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 MTSS1O43312 755 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 NUAK1O60285 661 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 UGT2B11O75310 529 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 ANXA9O76027 345 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 PRKD3O94806 890 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 CPNE6O95741 557 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 CHRNA1P02708 482 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 CYBBP04839 570 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 INSRRP14616 1297 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 SPNP16150 400 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 IMPDH1P20839 514 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 TGM1P22735 817 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 PIK3CGP48736 1102 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 POLR2JP52435 117 aaKnown RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 GP2P55259 537 aaKnown RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 MBTD1Q05BQ5 628 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 NR6A1Q15406 480 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 SMN1Q16637 294 aaKnown RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 TXNDC11Q6PKC3 985 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 RBM23Q86U06 439 aaKnown RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 FBXO16Q8IX29 292 aaPredicted RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 EID3Q8N140 333 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 MINDY1Q8N5J2 469 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 LEMD2Q8NC56 503 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 APPL2Q8NEU8 664 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 OR13J1Q8NGT2 312 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 ISL2Q96A47 359 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 EFHD2Q96C19 240 aaPredicted RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 LGALS12Q96DT0 336 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 TMEM246Q9BRR3 403 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 DCSTAMPQ9H295 470 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 DSN1Q9H410 356 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 FZD8Q9H461 694 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 PDZD7Q9H5P4 517 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 ACTR8Q9H981 624 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 NT5MQ9NPB1 228 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 PAK1IP1Q9NWT1 392 aaPredicted RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 HACD3Q9P035 362 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 KIF17Q9P2E2 1029 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 C3orf18Q9UK00 162 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 ZNF214Q9UL59 606 aaPredicted RBP6.62□□□□□ -1.35
LMO3-235ENST00000616247 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
LMO3-235ENST00000616247 A0A1W2PP18 115 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZSCAN5BA6NJL1 495 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 YJEFN3A6XGL0 299 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 H0YAE9 185 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SLC22A1O15245 554 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 BEST1O76090 585 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 GOT2P00505 430 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 LCKP06239 509 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CCR1P32246 355 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DEFA1P59665 94 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DEFA3P59666 94 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TAB1Q15750 504 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 HIST2H2ACQ16777 129 aaPredicted RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 LRIT3Q3SXY7 679 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZNF678Q5SXM1 525 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 NEK5Q6P3R8 708 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ARMCX2Q7L311 632 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DET1Q7L5Y6 550 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 LRRC49Q8IUZ0 686 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 FBXO39Q8N4B4 442 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TTC39CQ8N584 583 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ATG16L2Q8NAA4 619 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 HDAC2Q92769 488 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 KCNN1Q92952 543 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CGREF1Q99674 301 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 NUAK2Q9H093 628 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 IRF2BPLQ9H1B7 796 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ABCG8Q9H221 673 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 AKIP1Q9NQ31 210 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
LMO3-235ENST00000616247 SARDHQ9UL12 918 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 KCTD3Q9Y597 815 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 FOCADQ5VW36 1801 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PTPRFP10586 1907 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DYRK3O43781 588 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 MT-ND2P03891 347 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 IFI30P13284 250 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PTPRAP18433 802 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PSMD8P48556 350 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 HNRNPFP52597 415 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 CDKN2DP55273 166 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 WNT3AP56704 352 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 OR2B6P58173 313 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 INCA1Q0VD86 236 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 RAPSNQ13702 412 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SELPLGQ14242 412 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SMU1Q2TAY7 513 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 STEAP3Q658P3 488 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZNF772Q68DY9 489 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms