RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 DYNLT1P63172 113 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 TLE1Q04724 770 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 CDC20Q12834 499 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 SLC14A2Q15849 920 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 KHDC1Q4VXA5 237 aaKnown RBP20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 RFX6Q8HWS3 928 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 ZNF547Q8IVP9 402 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 TRIM48Q8IWZ4 208 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 OR8K1Q8NGG5 319 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 RNF31Q96EP0 1072 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 TIMM29Q9BSF4 260 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 EFHD1Q9BUP0 239 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 GLOD4Q9HC38 313 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 TUBD1Q9UJT1 453 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 SPO11Q9Y5K1 396 aa20.46■□□□□ 0.87
TRAPPC3-208ENST00000616074 PDZK1P1A8MUH7 402 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 TPM3P06753 285 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 BRAFP15056 766 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 ZFXP17010 805 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 OAS2P29728 719 aaKnown RBP20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 ARHGAP25P42331 645 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 NOP2P46087 812 aaKnown RBP20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 FOXM1Q08050 763 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 STARD8Q92502 1023 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 RNF25Q96BH1 459 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 TGM7Q96PF1 710 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 TRIT1Q9H3H1 467 aaKnown RBP20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 SPTLC3Q9NUV7 552 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 TMPRSS11EQ9UL52 423 aa20.45■□□□□ 0.86
TRAPPC3-208ENST00000616074 MAST4O15021 2626 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 A0A0A6YYK5 440 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 VEGFDO43915 354 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 PMPCBO75439 489 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 CDK14O94921 469 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 NDST3O95803 873 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 RPL10P27635 214 aaKnown RBP20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 STAT5AP42229 794 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 LEPRP48357 1165 aaKnown RBP20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 SEPHS1P49903 392 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 TEX44Q53QW1 395 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 VPS35Q96QK1 796 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 CHP1Q99653 195 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 BPIFA1Q9NP55 256 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 POT1Q9NUX5 634 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 UBP1Q9NZI7 540 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 MRPS18BQ9Y676 258 aaKnown RBP20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 RELNP78509 3460 aa20.44■□□□□ 0.86
TRAPPC3-208ENST00000616074 FLNCQ14315 2725 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 OR52A4PA6NMU1 304 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 TNNT1P13805 278 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ZNF28P17035 718 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 AMD1P17707 334 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 PTPN3P26045 913 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 DRG2P55039 364 aaKnown RBP20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 SH3BP2P78314 561 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 TRIM14Q14142 442 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 MAP7Q14244 749 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 SKIDA1Q1XH10 827 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ATP13A5Q4VNC0 1218 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ATP1A1-AS1Q5TC04 95 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 LRRC38Q5VT99 294 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ABRAXAS1Q6UWZ7 409 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 MFSD7Q6UXD7 560 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 C11orf96Q7Z7L8 435 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 RHOT2Q8IXI1 618 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ESX1Q8N693 406 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 RSC1A1Q92681 617 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 TEKT5Q96M29 485 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ULBP3Q9BZM4 244 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ZNF768Q9H5H4 540 aaKnown RBP20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ABHD10Q9NUJ1 306 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 ZNHIT6Q9NWK9 470 aaKnown RBP20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 HYOU1Q9Y4L1 999 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 PTPN13Q12923 2485 aa20.43■□□□□ 0.86
TRAPPC3-208ENST00000616074 TOX3O15405 576 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 F8A1P23610 371 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 CAPZBP47756 277 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 GPR18Q14330 331 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 PRKD1Q15139 912 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 NOMO1Q15155 1222 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 DEFB109BQ30KR1 87 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 ODF2Q5BJF6 829 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 CCDC70Q6NSX1 233 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 C16orf46Q6P387 395 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 RHOT1Q8IXI2 618 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 OR6C1Q96RD1 312 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 SRPK1Q96SB4 655 aaKnown RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 EPN3Q9H201 632 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 SLC40A1Q9NP59 571 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 ZNF71Q9NQZ8 489 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 DDX56Q9NY93 547 aaKnown RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 SAE1Q9UBE0 346 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 TRIM10Q9UDY6 481 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 RPS6KL1Q9Y6S9 549 aa20.42■□□□□ 0.86
TRAPPC3-208ENST00000616074 KIF1CO43896 1103 aaKnown RBP20.41■□□□□ 0.86
TRAPPC3-208ENST00000616074 RASSF9O75901 435 aa20.41■□□□□ 0.86
TRAPPC3-208ENST00000616074 TCN2P20062 427 aa20.41■□□□□ 0.86
TRAPPC3-208ENST00000616074 IDSP22304 550 aa20.41■□□□□ 0.86
TRAPPC3-208ENST00000616074 CD68P34810 354 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC3-208ENST00000616074 HMGCLP35914 325 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms