RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RGS13O14921 159 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 GMNNO75496 209 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 ALBP02768 609 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 LCP1P13796 627 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 GPR15P49685 360 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 NDUFV1P49821 464 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 SELENBP1Q13228 472 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 SDHAF4Q5VUM1 108 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 CLEC20AQ6ZU45 233 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 DHRS1Q96LJ7 313 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 UBXN10Q96LJ8 280 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 EMILIN2Q9BXX0 1053 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 FBXO8Q9NRD0 319 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 IARS2Q9NSE4 1012 aaKnown RBP21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 ENPP5Q9UJA9 477 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 IRAK3Q9Y616 596 aa21.76■■□□□ 1.07
POLR2J3-220ENST00000613744 F5H423 210 aaPredicted RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SLC22A1O15245 554 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 TGM5O43548 720 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 MYO1DO94832 1006 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SEC24AO95486 1093 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 CLIC3O95833 236 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 EEF1B2P24534 225 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ETFBP38117 255 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 MAPRE1Q15691 268 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 COQ5Q5HYK3 327 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 CNSTQ6PJW8 725 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ITIH5Q86UX2 942 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 PIGZQ86VD9 579 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SPPL2CQ8IUH8 684 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 MMAAQ8IVH4 418 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SCN4BQ8IWT1 228 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ACVR1CQ8NER5 493 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 BPIFB6Q8NFQ5 453 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ZNF461Q8TAF7 563 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 GPR152Q8TDT2 470 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SMARCD1Q96GM5 515 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SEPT5Q99719 369 aaPredicted RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 CPNE5Q9HCH3 593 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ACSS2Q9NR19 701 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 DNMT3BQ9UBC3 853 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 PCDHB5Q9Y5E4 795 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 NOX1Q9Y5S8 564 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 FAM149AA5PLN7 773 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 MFSD11O43934 449 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 PLA2G16P53816 162 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 RAD23AP54725 363 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 RAB10P61026 200 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 RAB33AQ14088 237 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SMAD1Q15797 465 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 DDR2Q16832 855 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 SCUBE3Q8IX30 993 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 FAM110BQ8TC76 370 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 HDAC2Q92769 488 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 HPS4Q9NQG7 708 aa21.75■■□□□ 1.07
POLR2J3-220ENST00000613744 ATG2AQ2TAZ0 1938 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 A0A087X1B8 175 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 SYNCRIPO60506 623 aaKnown RBP21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 UGT2B11O75310 529 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 BCAS1O75363 584 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 LDLRP01130 860 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 ADH1AP07327 375 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 POLR2EP19388 210 aaKnown RBP21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 GRIK1P39086 918 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 ARPC4P59998 168 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 NFE2Q16621 373 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 CRTC3Q6UUV7 619 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 LAYNQ6UX15 382 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 DNAJC14Q6Y2X3 702 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 LACC1Q8IV20 430 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 TXNDC15Q96J42 360 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 SMOQ99835 787 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 SP140LQ9H930 580 aa21.74■■□□□ 1.07
POLR2J3-220ENST00000613744 ABLIM3O94929 683 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 HDCP19113 662 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 GLRBP48167 497 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 CAMK2BQ13554 666 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 KIAA0408Q6ZU52 694 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 STRADAQ7RTN6 431 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 PID1Q7Z2X4 250 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 RDH12Q96NR8 316 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 CYP2S1Q96SQ9 504 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 POMKQ9H5K3 350 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 SACM1LQ9NTJ5 587 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ARPC2O15144 300 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 GABBR2O75899 941 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 KCNH1O95259 989 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 GOT1P17174 413 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ABCG1P45844 678 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 CREMQ03060 361 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 TOP3AQ13472 1001 aaPredicted RBP21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 SPCS2Q15005 226 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 PAFAH1B3Q15102 231 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 PERM1Q5SV97 790 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 KCTD11Q693B1 232 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 PTRH1Q86Y79 214 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 DNAAF3Q8N9W5 541 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 TXNDC5Q8NBS9 432 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ZMIZ2Q8NF64 920 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms