RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 EIF1AYO14602 144 aaKnown RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 ZNF283Q8N7M2 679 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 ZNF557Q8N988 423 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 SNX18Q96RF0 628 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 RGCCQ9H4X1 137 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 NMRK2Q9NPI5 230 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 H3BM21 787 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 CYP27B1O15528 508 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 PEX14O75381 377 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 CYP4B1P13584 511 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 TNNI3P19429 210 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 SREBF1P36956 1147 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 RAB41Q5JT25 222 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 LDLRAP1Q5SW96 308 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 C3orf33Q6P1S2 294 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 MOB2Q70IA6 237 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 OR7G2Q8NG99 324 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 HDAC10Q969S8 669 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 RSPH9Q9H1X1 276 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 PIF1Q9H611 641 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 TESMINQ9Y4I5 508 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 NCF1BA6NI72 391 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 NCF1CA8MVU1 366 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 HLA-DPB1P04440 258 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 NCF1P14598 390 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 CRATP43155 626 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 COMMD7Q86VX2 200 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 IFT46Q9NQC8 304 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 H0Y858 1186 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 UQCRC1P31930 480 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 MTAPQ13126 283 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 TCEA2Q15560 299 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 SYVN1Q86TM6 617 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 TICAM1Q8IUC6 712 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 GDPD1Q8N9F7 314 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 ZNF69Q9UC07 566 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 OAS3Q9Y6K5 1087 aaKnown RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 CRB1P82279 1406 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 NARSO43776 548 aaKnown RBP8.71□□□□□ -1.02
TTC28-208ENST00000612946 GMDSO60547 372 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 CPB1P15086 417 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 VN1R5Q7Z5H4 357 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 DAW1Q8N136 415 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 SCML4Q8N228 414 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 SLC44A3Q8N4M1 653 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 DDIT4Q9NX09 232 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 FAM50BQ9Y247 325 aa8.71□□□□□ -1.02
TTC28-208ENST00000612946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 ATE1O95260 518 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ENTPD1P49961 510 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SLC3A1Q07837 685 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ZNF697Q5TEC3 545 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 AADACL4Q5VUY2 407 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 FAM199XQ6PEV8 388 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 GPR180Q86V85 440 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CISHQ9NSE2 258 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 LRRN3E7EW58 273 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 F5H5T6 163 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CSTF1Q05048 431 aaKnown RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 SLC18A2Q05940 514 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 LCP2Q13094 533 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CPTPQ5TA50 214 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 WDR53Q7Z5U6 358 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 ZUFSPQ96AP4 578 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 LRRN3Q9H3W5 708 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 C1orf109Q9NX04 203 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ACTR3BQ9P1U1 418 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NT5C1B-RDH14C9J2C7 533 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 EGFRP00533 1210 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ADH6P28332 368 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 APLP1P51693 650 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CDH11P55287 796 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 GCNT6Q5T4J0 391 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 GDPGP1Q6ZNW5 385 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 LRRC55Q6ZSA7 311 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TWNKQ96RR1 684 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TRIM36Q9NQ86 728 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PAQR5Q9NXK6 330 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 ERBB3P21860 1342 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 BORCS7-ASMTA0A0B4J1R7 106 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 BTN3A1O00481 513 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SPTLC1O15269 473 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 OR56A5P0C7T3 313 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ECHS1P30084 290 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PTPN5P54829 565 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TAS2R41P59536 307 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NAPRTQ6XQN6 538 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 KLHL36Q8N4N3 616 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NATD1Q8N6N6 113 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 STON2Q8WXE9 905 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ARL11Q969Q4 196 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms