RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZKSCAN8Q15776 578 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 LGSNQ5TDP6 509 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ESRP1Q6NXG1 681 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 LVRNQ6Q4G3 990 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 RANBP10Q6VN20 620 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF765Q7L2R6 523 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 HSD11B1LQ7Z5J1 315 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PACS2Q86VP3 889 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 NRSN1Q8IZ57 195 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 MPP5Q8N3R9 675 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 GBP7Q8N8V2 638 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 GSDMBQ8TAX9 411 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 TCP10LQ8TDR4 215 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 LRRC8CQ8TDW0 803 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF75CPQ92670 426 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 APOPT1Q96IL0 206 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ELF4Q99607 663 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PAIP2Q9BPZ3 127 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 MBNL1Q9NR56 388 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 SMYD2Q9NRG4 433 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ABCF3Q9NUQ8 709 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 MOCS1Q9NZB8 636 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PKD2L2Q9NZM6 624 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 HACD3Q9P035 362 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 CDV3Q9UKY7 258 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PCDHGB2Q9Y5G2 931 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 LAMA1P25391 3075 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 DNAH14Q0VDD8 3507 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 CFAP54Q96N23 3096 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SPTY2D1-AS1A0A0U1RR47 76 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 A0A1B0GTQ1 180 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SDR42E2A6NKP2 422 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ERI2A8K979 691 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CXorf49A8MYA2 514 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 RASSF9O75901 435 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 KRT37O76014 449 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PCCBP05166 539 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SNRPAP09012 282 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 HOXC4P09017 264 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 C1SP09871 688 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ADRA1DP25100 572 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 HTR1BP28222 390 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 TRIM23P36406 574 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CCNFP41002 786 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 GRIA1P42261 906 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SPINT3P49223 89 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ARRB1P49407 418 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CCT8P50990 548 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 THOP1P52888 689 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 DNAJC3Q13217 504 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PDE1CQ14123 709 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 INPP5AQ14642 412 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 UAP1L1Q3KQV9 507 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SIRPB2Q5JXA9 342 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 KCTD11Q693B1 232 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PNCKQ6P2M8 343 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 Q6ZVL8 140 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CCNJLQ8IV13 435 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SLC22A18ASQ8N1D0 253 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SLC25A41Q8N5S1 370 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 AP2M1Q96CW1 435 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 MTBPQ96DY7 904 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 TBL1YQ9BQ87 522 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 RTKNQ9BST9 563 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 APOOQ9BUR5 198 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 FICDQ9BVA6 458 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 GPR63Q9BZJ6 419 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CDH19Q9H159 772 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 LRRC40Q9H9A6 602 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 RAD18Q9NS91 495 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 TM7SF3Q9NS93 570 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 MKS1Q9NXB0 559 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF711Q9Y462 761 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 A0A0U1RQS6 177 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 CACNB4O00305 520 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 RFPL1O75677 317 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 AP2A1O95782 977 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PIRTP0C851 137 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 KELP23276 732 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 HMGCLP35914 325 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 GPR1P46091 355 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SERPINB9P50453 376 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 MGAT5Q09328 741 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 BNIP1Q12981 228 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ZDHHC20Q5W0Z9 365 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 TRMT10BQ6PF06 316 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 MACC1Q6ZN28 852 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 DBX2Q6ZNG2 339 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 TIFABQ6ZNK6 161 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 FAM47EQ6ZV65 393 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 LYSMD3Q7Z3D4 306 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 LINC00523Q86TU6 105 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PARGQ86W56 976 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PPM1NQ8N819 430 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 PLA2G15Q8NCC3 412 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms