RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 A0A088AWK7 358 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 A0A1B0GVM2 712 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MTMR11A4FU01 709 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 B4E171 279 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PODXLO00592 558 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 VILLO15195 856 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 YKT6O15498 198 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 TSPAN3O60637 253 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SLC43A1O75387 559 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 STBD1O95210 358 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 TUBB4AP04350 444 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 WNT1P04628 370 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ITGA2BP08514 1039 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SBK3P0C264 359 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 LIPCP11150 499 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ATF6P18850 670 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 NR1D1P20393 614 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MARCKSP29966 332 aaPredicted RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 EIF2DP41214 584 aaKnown RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 TSPAN7P41732 249 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MMP13P45452 471 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ARRB1P49407 418 aaPredicted RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PTENP60484 403 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MBTD1Q05BQ5 628 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 GPR17Q13304 367 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 BMPR2Q13873 1038 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MGAT5BQ3V5L5 792 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SFMBT2Q5VUG0 894 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 HIBCHQ6NVY1 386 aaPredicted RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 DSTYKQ6XUX3 929 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 NIPA1Q7RTP0 329 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ZNF551Q7Z340 670 aaPredicted RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 GALNT5Q7Z7M9 940 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ZSCAN30Q86W11 494 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 ITPRIPQ8IWB1 547 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 CACNA2D3Q8IZS8 1091 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 AOPEPQ8N6M6 819 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PPM1NQ8N819 430 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 GLIS1Q8NBF1 620 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PCYOX1LQ8NBM8 494 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 APPL2Q8NEU8 664 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 WDR36Q8NI36 951 aaKnown RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MAPK15Q8TD08 544 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 RSRC1Q96IZ7 334 aaKnown RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 C5orf34Q96MH7 638 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PPP1R10Q96QC0 940 aaKnown RBP4.48□□□□□ -1.69
LINC00540-201ENST00000611481 TRIB1Q96RU8 372 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SLC22A12Q96S37 553 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 NUP58Q9BVL2 599 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 PRDM8Q9NQV8 689 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SH3BP4Q9P0V3 963 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 SEL1LQ9UBV2 794 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 GDAQ9Y2T3 454 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 DOCK9Q9BZ29 2069 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 MYOFQ9NZM1 2061 aa4.48□□□□□ -1.69
LINC00540-201ENST00000611481 DENND4CQ5VZ89 1909 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TRAV19A0A0A6YYK7 116 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 A0A1B0GUA9 196 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 GOLGA6L3A6NEY3 463 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 POM121BA6NF01 834 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TISP43B9A030 160 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 WASH3PC4AMC7 463 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 F5H697 171 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TRIAP1O43715 76 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 SDC3O75056 442 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 LARGE1O95461 756 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 CD1EP15812 388 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 NDUFB7P17568 137 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 XBP1P17861 261 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 CD27P26842 260 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 PDIA3P30101 505 aaKnown RBP4.47□□□□□ -1.69
LINC00540-201ENST00000611481 NR4A2P43354 598 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 YWHAHQ04917 246 aaPredicted RBP4.47□□□□□ -1.69
LINC00540-201ENST00000611481 FOXO1Q12778 655 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 POSTNQ15063 836 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 ZACNQ401N2 412 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 FUT11Q495W5 492 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 SLC2A7Q6PXP3 512 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 APOA5Q6Q788 366 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 ANO5Q75V66 913 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 ESX1Q8N693 406 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 LSMEM1Q8N8F7 131 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 ARL14EPQ8N8R7 260 aaPredicted RBP4.47□□□□□ -1.69
LINC00540-201ENST00000611481 STKLD1Q8NE28 680 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 OTUD7AQ8TE49 926 aaPredicted RBP4.47□□□□□ -1.69
LINC00540-201ENST00000611481 ARRDC3Q96B67 414 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 BIRC7Q96CA5 298 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 SIPA1Q96FS4 1042 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TMX3Q96JJ7 454 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 SMOQ99835 787 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 GABRG3Q99928 467 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 AP1M1Q9BXS5 423 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 C22orf23Q9BZE7 217 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TMEM206Q9H813 350 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 GDF3Q9NR23 364 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
LINC00540-201ENST00000611481 KCND3Q9UK17 655 aa4.47□□□□□ -1.69
LINC00540-201ENST00000611481 TP53TG5Q9Y2B4 290 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms