RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PPM1DO15297 605 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 PRAMEF10O60809 474 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 CD1CP29017 333 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 ETV5P41161 510 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 CD86P42081 329 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 C16orf72Q14CZ0 275 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 OASLQ15646 514 aaKnown RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 KIAA1614Q5VZ46 1190 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 ZNF574Q6ZN55 896 aaPredicted RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 TTC9Q92623 222 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 MLPHQ9BV36 600 aaPredicted RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 MAK16Q9BXY0 300 aaKnown RBP21.55■■□□□ 1.04
CBWD3-207ENST00000611426 ZNHIT2Q9UHR6 403 aa21.55■■□□□ 1.04
CBWD3-207ENST00000611426 ANKRD66B4E2M5 251 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 CST8O60676 142 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 GAS8O95995 478 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 MMP2P08253 660 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 MYBL2P10244 700 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 LIPCP11150 499 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 PPIDQ08752 370 aaKnown RBP21.54■■□□□ 1.04
CBWD3-207ENST00000611426 PTK6Q13882 451 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 LRP8Q14114 963 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 QPCTQ16769 361 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 ZNF605Q86T29 641 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 RCBTB1Q8NDN9 531 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 CCHCR1Q8TD31 782 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 ATG4AQ8WYN0 398 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 ADGRE3Q9BY15 652 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 FAM83DQ9H4H8 585 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 ZNF446Q9NWS9 450 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 SEPT10Q9P0V9 454 aa21.54■■□□□ 1.04
CBWD3-207ENST00000611426 TRBV23OR9-2A0A075B6M9 112 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 EFSO43281 561 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 SPINT3P49223 89 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 AP1B1Q10567 949 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 LY6DQ14210 128 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 LLGL1Q15334 1064 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 TMEM164Q5U3C3 297 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 NKAIN2Q5VXU1 208 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 KAZNQ674X7 775 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 PLD5Q8N7P1 536 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 CNTD1Q8N815 330 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 CAVIN3Q969G5 261 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 KCNK4Q9NYG8 393 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 PKD2L2Q9NZM6 624 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 PIEZO2Q9H5I5 2752 aa21.53■■□□□ 1.04
CBWD3-207ENST00000611426 IGHV5-10-1A0A0J9YXX1 117 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 C9orf172C9J069 976 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 APOL1O14791 398 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ZFXP17010 805 aaPredicted RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ECHS1P30084 290 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 CARSP49589 748 aaKnown RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 IFI35P80217 286 aaPredicted RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ZBTB17Q13105 803 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 CHST15Q7LFX5 561 aaPredicted RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ZFAND4Q86XD8 727 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ACTL9Q8TC94 416 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 CCDC74BQ96LY2 380 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 TRIM51Q9BSJ1 452 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 FOXJ2Q9P0K8 574 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 VPS18Q9P253 973 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 CNOT6Q9ULM6 557 aaKnown RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 PRKAB1Q9Y478 270 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 PCDHB11Q9Y5F2 797 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ZFC3H1O60293 1989 aaKnown RBP21.52■■□□□ 1.04
CBWD3-207ENST00000611426 ZNF462Q96JM2 2506 aa21.52■■□□□ 1.04
CBWD3-207ENST00000611426 IGHV1OR21-1A0A087WYE8 117 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 RGSL1A5PLK6 1076 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 HGSO14964 777 aaPredicted RBP21.51■■□□□ 1.03
CBWD3-207ENST00000611426 CCL4P13236 92 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 KCNJ1P48048 391 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 LIMK2P53671 638 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 NOMO1Q15155 1222 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 HENMT1Q5T8I9 393 aaKnown RBP21.51■■□□□ 1.03
CBWD3-207ENST00000611426 RFX6Q8HWS3 928 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 OR4D9Q8NGE8 314 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 SLC38A3Q99624 504 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 CEP41Q9BYV8 373 aa21.51■■□□□ 1.03
CBWD3-207ENST00000611426 OAS3Q9Y6K5 1087 aaKnown RBP21.51■■□□□ 1.03
CBWD3-207ENST00000611426 FADS2P1A8MWK0 482 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 DNAJC6O75061 913 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 CD82P27701 267 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 FASLGP48023 281 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 PPM1FP49593 454 aaPredicted RBP21.5■■□□□ 1.03
CBWD3-207ENST00000611426 OTUD4Q01804 1114 aaKnown RBP21.5■■□□□ 1.03
CBWD3-207ENST00000611426 SQSTM1Q13501 440 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 TRA2AQ13595 282 aaKnown RBP eCLIP21.5■■□□□ 1.03
CBWD3-207ENST00000611426 GALNT3Q14435 633 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 PDK1Q15118 436 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 MANEAQ5SRI9 462 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 FAM182AQ5T1J6 154 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 KDELC2Q7Z4H8 507 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 SFRP1Q8N474 314 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 SLC37A2Q8TED4 501 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 AHCYL2Q96HN2 611 aaKnown RBP21.5■■□□□ 1.03
CBWD3-207ENST00000611426 AGAP3Q96P47 875 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 DPYSL5Q9BPU6 564 aa21.5■■□□□ 1.03
CBWD3-207ENST00000611426 FUT8Q9BYC5 575 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms