RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PARP6Q2NL67 630 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 P3H1Q32P28 736 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 SNAP47Q5SQN1 464 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 PDPK2PQ6A1A2 396 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 RAB11FIP2Q7L804 512 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 ZNF547Q8IVP9 402 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 TRIM48Q8IWZ4 208 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 SFRP1Q8N474 314 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 RASGEF1AQ8N9B8 481 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 OR52K1Q8NGK4 314 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 WDR48Q8TAF3 677 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 JPH3Q8WXH2 748 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 RNF31Q96EP0 1072 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 VPS35Q96QK1 796 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 STRADBQ9C0K7 418 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 ASB8Q9H765 288 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 LRRC40Q9H9A6 602 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 RMI1Q9H9A7 625 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 SMARCAL1Q9NZC9 954 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 SCHIP1Q9P0W5 487 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 OR52A4PA6NMU1 304 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 A8MU76 341 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 KMOO15229 486 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 VEGFDO43915 354 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 CRTAMO95727 393 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 JMJD7P0C870 316 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 F3P13726 295 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 RBMS1P29558 406 aaKnown RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 MAPK10P53779 464 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 ITGA9Q13797 1035 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 SIX1Q15475 284 aaPredicted RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 LONRF2Q1L5Z9 754 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 ZRANB3Q5FWF4 1079 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 FNBP1LQ5T0N5 605 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 KCTD11Q693B1 232 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 PIM3Q86V86 326 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 C17orf82Q86X59 251 aaPredicted RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 CCDC89Q8N998 374 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 DNAAF3Q8N9W5 541 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 DDHD1Q8NEL9 900 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 WDR36Q8NI36 951 aaKnown RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 ZNF398Q8TD17 642 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 AHCYL2Q96HN2 611 aaKnown RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 CCDC74BQ96LY2 380 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 TBC1D10AQ9BXI6 508 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 STN1Q9H668 368 aaKnown RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 ASCL3Q9NQ33 180 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 RAB6BQ9NRW1 208 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
HDDC2-204ENST00000608295 DKK4Q9UBT3 224 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 LHX6Q9UPM6 363 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 LOXL2Q9Y4K0 774 aa14.27□□□□□ -0.13
HDDC2-204ENST00000608295 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 A6NCN8 305 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 OR51F1A6NGY5 319 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 PLD2O14939 933 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 CHUKO15111 745 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 SRP72O76094 671 aaKnown RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 CPNE6O95741 557 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 AP2A1O95782 977 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 MSH3P20585 1137 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 CD1CP29017 333 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 MC4RP32245 332 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 ETV5P41161 510 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 GRIA1P42261 906 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 ABCG1P45844 678 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 KCNJ1P48048 391 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 LSSP48449 732 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 VPS41P49754 854 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 PCBP4P57723 403 aaKnown RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 BASP1P80723 227 aaKnown RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 PEX6Q13608 980 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 NFE2L1Q14494 772 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 TRIP13Q15645 432 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 LDLRAP1Q5SW96 308 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 TMEM220Q6QAJ8 160 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 LRRC69Q6ZNQ3 347 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 FAM83HQ6ZRV2 1179 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 GSTA5Q7RTV2 222 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 ZNF438Q7Z4V0 828 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 SLITRK4Q8IW52 837 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 CACTIN-AS1Q8N1I8 211 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 FGF11Q92914 225 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 PRR11Q96HE9 360 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 MS4A14Q96JA4 679 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 TMEM74Q96NL1 305 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 PPP1R2P1Q96PQ5 205 aa14.26□□□□□ -0.13
HDDC2-204ENST00000608295 ZCCHC2Q9C0B9 1178 aaKnown RBP14.26□□□□□ -0.13
HDDC2-204ENST00000608295 BPTFQ12830 3046 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms