RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	KLHL6	Q8WZ60	621 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	PSMG3-AS1	Q96PY0	264 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	TIMM29	Q9BSF4	260 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	ADGRE3	Q9BY15	652 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	OSGEPL1	Q9H4B0	414 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	MAGEE1	Q9HCI5	957 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	TMPRSS11E	Q9UL52	423 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	PCDHGA6	Q9Y5G7	932 aa		20.69	■□□□□ 0.9
NECAB3-222	ENST00000607805	CRYBG3	Q68DQ2	2970 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	KCNK1	O00180	336 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	KIF1C	O43896	1103 aa	Known RBP	20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	RECK	O95980	971 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	VIP	P01282	170 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	NR1D1	P20393	614 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	SSR1	P43307	286 aa	Known RBP	20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	CAPZB	P47756	277 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	SEPT6	Q14141	434 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	KHDC1	Q4VXA5	237 aa	Known RBP	20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	FAM182A	Q5T1J6	154 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	WASH2P	Q6VEQ5	465 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	C11orf96	Q7Z7L8	435 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	MAP7D3	Q8IWC1	876 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	PLD5	Q8N7P1	536 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	RSC1A1	Q92681	617 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	RNF31	Q96EP0	1072 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	IMP4	Q96G21	291 aa	Known RBP	20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	TGM7	Q96PF1	710 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	RNF157	Q96PX1	679 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	OR6C1	Q96RD1	312 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	SLC40A1	Q9NP59	571 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	WASH6P	Q9NQA3	447 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	SEMA5B	Q9P283	1151 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	EPHA6	Q9UF33	1036 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	PIKFYVE	Q9Y2I7	2098 aa		20.68	■□□□□ 0.9
NECAB3-222	ENST00000607805	FER1L5	A0AVI2	2057 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	KMO	O15229	486 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	KIAA0754	O94854	1291 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	NTRK1	P04629	796 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	GJC1	P36383	396 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	SEPHS1	P49903	392 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	AGAP9	Q5VTM2	703 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	CRTC3	Q6UUV7	619 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	LRRTM4	Q86VH4	590 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	FAM26E	Q8N5C1	309 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	CCNY	Q8ND76	341 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	RAB33B	Q9H082	229 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	BRD8	Q9H0E9	1235 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	POT1	Q9NUX5	634 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	SHOC2	Q9UQ13	582 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	POLH	Q9Y253	713 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	PCDHB3	Q9Y5E6	796 aa		20.67	■□□□□ 0.9
NECAB3-222	ENST00000607805	ANKRD12	Q6UB98	2062 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	MTSS1	O43312	755 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	VEGFD	O43915	354 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	SPAG6	O75602	509 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	MTA2	O94776	668 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	NDUFA10	O95299	355 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	KRT7	P08729	469 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	PIRT	P0C851	137 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	BPI	P17213	487 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	KDELR1	P24390	212 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	ZBED6	P86452	979 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	ERV3-1	Q14264	604 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	INSC	Q1MX18	579 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	PLA2G4E	Q3MJ16	856 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	ALS2CL	Q60I27	953 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	TMEM135	Q86UB9	458 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	RAPGEF5	Q92565	580 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	RAD18	Q9NS91	495 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	KCND3	Q9UK17	655 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	CAPN11	Q9UMQ6	739 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	ZNF711	Q9Y462	761 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	DOPEY1	Q5JWR5	2465 aa		20.66	■□□□□ 0.9
NECAB3-222	ENST00000607805	OR52A4P	A6NMU1	304 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	ZNF487	B1APH4	448 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	AMD1	P17707	334 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	NELFE	P18615	380 aa	Known RBP	20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	RPL10	P27635	214 aa	Known RBP	20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	GPR18	Q14330	331 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	SLC14A2	Q15849	920 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	APLF	Q8IW19	511 aa	Predicted RBP	20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	TRIM48	Q8IWZ4	208 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	RBM12B	Q8IXT5	1001 aa	Known RBP	20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	STAMBPL1	Q96FJ0	436 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	VPS35	Q96QK1	796 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	UVRAG	Q9P2Y5	699 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	DNAJC16	Q9Y2G8	782 aa		20.65	■□□□□ 0.9
NECAB3-222	ENST00000607805	CELSR2	Q9HCU4	2923 aa		20.64	■□□□□ 0.9
NECAB3-222	ENST00000607805	CREBBP	Q92793	2442 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	C3orf70	A6NLC5	250 aa	Predicted RBP	20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	MKRN2OS	H3BPM6	223 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	MTX2	O75431	263 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	CREG1	O75629	220 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	TIAF1	O95411	115 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	SERPINC1	P01008	464 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	NOP2	P46087	812 aa	Known RBP	20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	PMS2	P54278	862 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	CDK18	Q07002	472 aa		20.64	■□□□□ 0.89
NECAB3-222	ENST00000607805	SEPT7	Q16181	437 aa	Known RBP	20.64	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms