RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	VIPR1	P32241	457 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	MMP13	P45452	471 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	FOXM1	Q08050	763 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	ITK	Q08881	620 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	GALNT2	Q10471	571 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	MRPL49	Q13405	166 aa	Known RBP	18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	CCDC50	Q8IVM0	306 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	PQLC3	Q8N755	202 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	REXO2	Q9Y3B8	237 aa	Known RBP	18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	PCDHGA6	Q9Y5G7	932 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	HEY1	Q9Y5J3	304 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	DUSP10	Q9Y6W6	482 aa		18.23	■□□□□ 0.51
LTBP4-231	ENST00000602251	GOLGA6L3	A6NEY3	463 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	NRDC	O43847	1150 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.22	■□□□□ 0.51	5e-12	■■□□□ 11.8
LTBP4-231	ENST00000602251	ANKRD34C	P0C6C1	535 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	LHCGR	P22888	699 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	CCNC	P24863	283 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	MAPK9	P45984	424 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	RIPPLY3	P57055	190 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	AP1S1	P61966	158 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	DPT	Q07507	201 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	LRP8	Q14114	963 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	INPP5J	Q15735	1006 aa	Predicted RBP	18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	MARK2	Q7KZI7	788 aa	Known RBP	18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	SRRM1	Q8IYB3	904 aa	Known RBP	18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	PRR7	Q8TB68	274 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	SH3KBP1	Q96B97	665 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	PHF12	Q96QT6	1004 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	DESI2	Q9BSY9	194 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	LACRT	Q9GZZ8	138 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	MLXIPL	Q9NP71	852 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	CELSR1	Q9NYQ6	3014 aa		18.22	■□□□□ 0.51
LTBP4-231	ENST00000602251	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TTC24	A2A3L6	582 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	C3orf70	A6NLC5	250 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	PJA2	O43164	708 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	HTRA2	O43464	458 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	KRT38	O76015	456 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	KIAA0754	O94854	1291 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	SOD1	P00441	154 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	GPR1	P46091	355 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	PGD	P52209	483 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	EPHA4	P54764	986 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	DYNLT1	P63172	113 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	GBE1	Q04446	702 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TFDP2	Q14188	446 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	IYD	Q6PHW0	289 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	MFSD7	Q6UXD7	560 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TECPR1	Q7Z6L1	1165 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TRIM74	Q86UV6	250 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	RCOR2	Q8IZ40	523 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	STAMBPL1	Q96FJ0	436 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TCTN2	Q96GX1	697 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	RBM41	Q96IZ5	413 aa	Known RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	NT5M	Q9NPB1	228 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	TBC1D29	Q9UFV1	150 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	ERRFI1	Q9UJM3	462 aa	Predicted RBP	18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	PCDHGC4	Q9Y5F7	938 aa		18.21	■□□□□ 0.51
LTBP4-231	ENST00000602251	ITPR3	Q14573	2671 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	ADGRG4	Q8IZF6	3080 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	MACROD2	A1Z1Q3	448 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PSMD11	O00231	422 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	MATN3	O15232	486 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	LDLR	P01130	860 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	DNASE1L3	Q13609	305 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PTPRR	Q15256	657 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PRR30	Q53SZ7	412 aa	Predicted RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	TFDP3	Q5H9I0	405 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	C1QL3	Q5VWW1	255 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	KAZN	Q674X7	775 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	SLC9A4	Q6AI14	798 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	ADAMTSL4	Q6UY14	1074 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	BZW1	Q7L1Q6	419 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	GALNT13	Q8IUC8	556 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PLXDC1	Q8IUK5	500 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	KATNAL2	Q8IYT4	538 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PLD5	Q8N7P1	536 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	C9orf72	Q96LT7	481 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	TSGA13	Q96PP4	275 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	NUDCD1	Q96RS6	583 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	SLC25A23	Q9BV35	468 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	TBC1D10A	Q9BXI6	508 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	EPB41L1	Q9H4G0	881 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	STN1	Q9H668	368 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	GRPEL1	Q9HAV7	217 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	DTL	Q9NZJ0	730 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PADI1	Q9ULC6	663 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	TTLL3	Q9Y4R7	772 aa		18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	PCDHGA9	Q9Y5G4	932 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	ZNF106	Q9H2Y7	1883 aa	Known RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251	MN1	Q10571	1320 aa	Predicted RBP	18.2	■□□□□ 0.5
LTBP4-231	ENST00000602251		A0A1W2PQ67	120 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PPP1R12A	O14974	1030 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PEX11B	O96011	259 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	CCNYL3	P0C7X3	344 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	CETN2	P41208	172 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	CDKN2B	P42772	138 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms