RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TSPAN33Q86UF1 283 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 CDH24Q86UP0 819 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 VSTM4Q8IW00 320 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 NXPE1Q8N323 547 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 SLC38A9Q8NBW4 561 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 RSC1A1Q92681 617 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 SCAMP4Q969E2 229 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 AP2M1Q96CW1 435 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 ZDHHC12Q96GR4 267 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 MRFAP1L1Q96HT8 127 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 SGSM3Q96HU1 749 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 PCMTD1Q96MG8 357 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 NLNQ9BYT8 704 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 RAB33BQ9H082 229 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 ZNF552Q9H707 407 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 METTL5Q9NRN9 209 aaKnown RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 SCHIP1Q9P0W5 487 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 VPS18Q9P253 973 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 CD84Q9UIB8 345 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 IGHV5-51A0A0C4DH38 117 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 CPNE3O75131 537 aaKnown RBP17.31■□□□□ 0.36
SSBP4-207ENST00000600244 ASMTLO95671 621 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 CYP2A6P11509 494 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-207ENST00000600244 ACP5P13686 325 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 SSTR2P30874 369 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 SLC19A1P41440 591 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 ATP1A4Q13733 1029 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 HGSNATQ68CP4 663 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 SIDT2Q8NBJ9 832 aaKnown RBP17.31■□□□□ 0.36
SSBP4-207ENST00000600244 GRHL3Q8TE85 626 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 FAR1Q8WVX9 515 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 SCRN2Q96FV2 425 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 LRFN5Q96NI6 719 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 CATSPERBQ9H7T0 1116 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 NLRC4Q9NPP4 1024 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 FGF21Q9NSA1 209 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-207ENST00000600244 MYO6Q9UM54 1294 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 PCDHGC4Q9Y5F7 938 aa17.31■□□□□ 0.36
SSBP4-207ENST00000600244 A0A0U1RQS6 177 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ALPPP05187 535 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 CAPN1P07384 714 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 SDC4P31431 198 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 PTPN9P43378 593 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 CAPZBP47756 277 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 PAPOLAP51003 745 aaKnown RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 CLCNKAP51800 687 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ACY1Q03154 408 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 KYNUQ16719 465 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 PLEKHS1Q5SXH7 462 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ZNF765Q7L2R6 523 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ZADH2Q8N4Q0 377 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 EXD1Q8NHP7 514 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 UBXN4Q92575 508 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ZNF514Q96K75 400 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 MCCC1Q96RQ3 725 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 CINPQ9BW66 212 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 SLC39A8Q9C0K1 460 aa17.3■□□□□ 0.36
SSBP4-207ENST00000600244 ZBTB20Q9HC78 741 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 CNOT6Q9ULM6 557 aaKnown RBP17.3■□□□□ 0.36
SSBP4-207ENST00000600244 TTC24A2A3L6 582 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-207ENST00000600244 C2CD4BA6NLJ0 364 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 SOCS5O75159 536 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 CPP00450 1065 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 JCHAINP01591 159 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 GYPCP04921 128 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 ATP1A1P05023 1023 aaKnown RBP17.29■□□□□ 0.36
SSBP4-207ENST00000600244 PYGLP06737 847 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 CD1EP15812 388 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 SOX5P35711 763 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 TBX2Q13207 712 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-207ENST00000600244 VWA2Q5GFL6 755 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 SLFN11Q7Z7L1 901 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 CELF6Q96J87 481 aaKnown RBP17.29■□□□□ 0.36
SSBP4-207ENST00000600244 PSKH2Q96QS6 385 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 PDCL3Q9H2J4 239 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 RMI1Q9H9A7 625 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 PPIL1Q9Y3C6 166 aa17.29■□□□□ 0.36
SSBP4-207ENST00000600244 MEN1O00255 615 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 CREB3O43889 395 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 SCRG1O75711 98 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 FAM155BO75949 473 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 IPO13O94829 963 aaKnown RBP17.28■□□□□ 0.36
SSBP4-207ENST00000600244 VIPP01282 170 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 KLK3P07288 261 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-207ENST00000600244 EBLN1P0CF75 366 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 CYP11B1P15538 503 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 RFTN1Q14699 578 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-207ENST00000600244 IRGCQ6NXR0 463 aa17.28■□□□□ 0.36
SSBP4-207ENST00000600244 CERS6Q6ZMG9 384 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms