RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 MARCH4Q9P2E8 410 aaPredicted RBP13.57□□□□□ -0.24
VRK3-219ENST00000600137 MOSPD1Q9UJG1 213 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
VRK3-219ENST00000600137 TEX264Q9Y6I9 313 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SLC30A1Q9Y6M5 507 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 SPTBN2O15020 2390 aa13.57□□□□□ -0.24
VRK3-219ENST00000600137 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 MYF5P13349 255 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 CTSEP14091 401 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 ITGALP20701 1170 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 ACRV1P26436 265 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 ELOCQ15369 112 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 DEFB133Q30KQ1 61 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 ZNF658BQ4V348 819 aaPredicted RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 KIAA0930Q6ICG6 404 aaPredicted RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 LVRNQ6Q4G3 990 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 GLRX5Q86SX6 157 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 SETD7Q8WTS6 366 aaKnown RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 ULK4Q96C45 1275 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 SGF29Q96ES7 293 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 OR2M4Q96R27 311 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 EBNA1BP2Q99848 306 aaKnown RBP13.56□□□□□ -0.24
VRK3-219ENST00000600137 TOR4AQ9NXH8 423 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 ZNHIT2Q9UHR6 403 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 GPR34Q9UPC5 381 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 PRSS21Q9Y6M0 314 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 CACNA1AO00555 2505 aa13.56□□□□□ -0.24
VRK3-219ENST00000600137 NEMP2A6NFY4 417 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 FFAR2O15552 330 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 USP1O94782 785 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 DKK1O94907 266 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 KCNK5O95279 499 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 VAPBO95292 243 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 EML2O95834 649 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 SDHBP21912 280 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 ELK3P41970 407 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 CLCNKAP51800 687 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 BBS9Q3SYG4 887 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 TMEM220Q6QAJ8 160 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 CHST15Q7LFX5 561 aaPredicted RBP13.55□□□□□ -0.24
VRK3-219ENST00000600137 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
VRK3-219ENST00000600137 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 UNC5BQ8IZJ1 945 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 CEP112Q8N8E3 955 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 BBOF1Q8ND07 529 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 OR6P1Q8NGX9 317 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 GDAP1Q8TB36 358 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 FBXO25Q8TCJ0 367 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 APOLD1Q96LR9 279 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 COPS8Q99627 209 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 ZDHHC18Q9NUE0 388 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 IL1RAPL1Q9NZN1 696 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 UTP11Q9Y3A2 253 aaKnown RBP13.55□□□□□ -0.24
VRK3-219ENST00000600137 RPS6KL1Q9Y6S9 549 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 FAM169AQ9Y6X4 670 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 RP1P56715 2156 aa13.55□□□□□ -0.24
VRK3-219ENST00000600137 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 A6NCN8 305 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 GOLGA8TH3BQL2 631 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 KMOO15229 486 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 CD3EAPO15446 510 aaKnown RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 NOBOXO60393 691 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 OR1I1O60431 355 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 ANXA6P08133 673 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 CEACAM1P13688 526 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 ATP1B2P14415 290 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 PRAMEP78395 509 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 LRP8Q14114 963 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.24
VRK3-219ENST00000600137 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 HIF1AQ16665 826 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 BCL7AQ4VC05 210 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 HP1BP3Q5SSJ5 553 aaPredicted RBP13.54□□□□□ -0.24
VRK3-219ENST00000600137 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 STEAP4Q687X5 459 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 C8orf74Q6P047 294 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 CRTC3Q6UUV7 619 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 TAS2R42Q7RTR8 314 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 TAF8Q7Z7C8 310 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 LRRTM4Q86VH4 590 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 PDIK1LQ8N165 341 aa13.54□□□□□ -0.24
VRK3-219ENST00000600137 CLDN19Q8N6F1 224 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms