RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MAGEA6P43360 314 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 ARSDP51689 593 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 CTSCP53634 463 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 TERF1P54274 439 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 SESN2P58004 480 aaPredicted RBP14.35□□□□□ -0.11
VRK3-206ENST00000594090 KCNJ11Q14654 390 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 TSTD2Q5T7W7 516 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 ZNF534Q76KX8 674 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 ZNF438Q7Z4V0 828 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 CREG2Q8IUH2 290 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 NXPE1Q8N323 547 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 ARL14Q8N4G2 192 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 DCBLD1Q8N8Z6 715 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 OR13J1Q8NGT2 312 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 SLC37A2Q8TED4 501 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 DDX47Q9H0S4 455 aaKnown RBP14.35□□□□□ -0.11
VRK3-206ENST00000594090 FAM96AQ9H5X1 160 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 LRIT1Q9P2V4 623 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 RIMKLBQ9ULI2 386 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 DNAJC16Q9Y2G8 782 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 TCAF1Q9Y4C2 921 aa14.35□□□□□ -0.11
VRK3-206ENST00000594090 GOLGA4Q13439 2230 aaKnown RBP14.35□□□□□ -0.11
VRK3-206ENST00000594090 TRBV5-4A0A0C4DH59 114 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 PRR19A6NJB7 356 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 AP3B1O00203 1094 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 SNX2O60749 519 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 CDKN1CP49918 316 aaPredicted RBP14.34□□□□□ -0.11
VRK3-206ENST00000594090 B4GALNT1Q00973 533 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 TARDBPQ13148 414 aaKnown RBP eCLIP14.34□□□□□ -0.11
VRK3-206ENST00000594090 CAMK2BQ13554 666 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 UNQ6494/PRO21346Q6UXR6 183 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 DET1Q7L5Y6 550 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 SPRED1Q7Z699 444 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 PPHLN1Q8NEY8 458 aaKnown RBP14.34□□□□□ -0.11
VRK3-206ENST00000594090 WDR48Q8TAF3 677 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 CPT1BQ92523 772 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 ZNF778Q96MU6 729 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 SYNDIG1Q9H7V2 258 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 SLC2A6Q9UGQ3 507 aa14.34□□□□□ -0.11
VRK3-206ENST00000594090 IGLV3-16A0A075B6K0 115 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 OR51F1A6NGY5 319 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 C1QTNF9BB2RNN3 333 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 NTN3O00634 580 aaPredicted RBP14.33□□□□□ -0.11
VRK3-206ENST00000594090 TCEA3O75764 348 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 TMEM63AO94886 807 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 C1QTNF9P0C862 333 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 PRSS56P0CW18 603 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 F3P13726 295 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 VCLP18206 1134 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 ACRV1P26436 265 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 FOXN2P32314 431 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 FASLGP48023 281 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 CRADDP78560 199 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 CCL7P80098 99 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 ACVR1Q04771 509 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 CACNG1Q06432 222 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 BIRC2Q13490 618 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 SPIDRQ14159 915 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 NR1D2Q14995 579 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 PCID2Q5JVF3 399 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 FNBP1LQ5T0N5 605 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 ANKRD22Q5VYY1 191 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 TMEM220Q6QAJ8 160 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 NLRP9Q7RTR0 991 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 SERPINA9Q86WD7 417 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 SFRP1Q8N474 314 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 Q8N9G6 341 aaPredicted RBP14.33□□□□□ -0.11
VRK3-206ENST00000594090 PEX13Q92968 403 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 CCDC97Q96F63 343 aaPredicted RBP14.33□□□□□ -0.11
VRK3-206ENST00000594090 DCUN1D1Q96GG9 259 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 ZNF514Q96K75 400 aaPredicted RBP14.33□□□□□ -0.11
VRK3-206ENST00000594090 CNTNAP3BQ96NU0 1288 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 DEPDC7Q96QD5 511 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 COPS8Q99627 209 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 CNTNAP3Q9BZ76 1288 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 IL22Q9GZX6 179 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 LRRN3Q9H3W5 708 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 PRDM8Q9NQV8 689 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 PCYOX1Q9UHG3 505 aa14.33□□□□□ -0.11
VRK3-206ENST00000594090 ASXL3Q9C0F0 2248 aa14.33□□□□□ -0.12
VRK3-206ENST00000594090 RP1P56715 2156 aa14.33□□□□□ -0.12
VRK3-206ENST00000594090 A0A1W2PQM1 296 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 CCDC162PA2VCL2 907 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 RHPN2P1A8MT19 583 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PPM1DO15297 605 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SGTAO43765 313 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 CSO75390 466 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 RPLP0P05388 317 aaKnown RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 RALBP11234 206 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 SLC2A4P14672 509 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 MGAT1P26572 445 aa14.32□□□□□ -0.12
VRK3-206ENST00000594090 PBLDP30039 288 aaPredicted RBP14.32□□□□□ -0.12
VRK3-206ENST00000594090 NPY2RP49146 381 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms