RNA–Protein interactions for RNA: ENST00000593261.1

NEK8-208, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-208ENST00000593261 PCOLCE2Q9UKZ9 415 aa6.09□□□□□ -1.43
NEK8-208ENST00000593261 RUVBL2Q9Y230 463 aaKnown RBP6.09□□□□□ -1.43
NEK8-208ENST00000593261 CDYLQ9Y232 598 aa6.09□□□□□ -1.43
NEK8-208ENST00000593261 POMPQ9Y244 141 aa6.09□□□□□ -1.43
NEK8-208ENST00000593261 ACOT9Q9Y305 439 aa6.09□□□□□ -1.43
NEK8-208ENST00000593261 UTP20O75691 2785 aaKnown RBP6.09□□□□□ -1.43
NEK8-208ENST00000593261 KNTC1P50748 2209 aa6.09□□□□□ -1.44
NEK8-208ENST00000593261 GOLGA8QA0A0J9YX86 632 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CCDC78A2IDD5 438 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 RGSL1A5PLK6 1076 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 GOLGA8OA6NCC3 632 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 GOLGA8NF8WBI6 632 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PLK4O00444 970 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 NEMP1O14524 444 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 PEX1O43933 1283 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 DLX3O60479 287 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ADAM23O75077 832 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CBFA2T3O75081 653 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ZMPSTE24O75844 475 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 VAPBO95292 243 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 MT-CYBP00156 380 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 AHSGP02765 367 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 LYNP07948 512 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SYPP08247 313 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CHRM1P11229 460 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 STMN1P16949 149 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 HMGA1P17096 107 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 SAT1P21673 171 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ATP5F1P24539 256 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 MAOBP27338 520 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ARNTP27540 789 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PPARGP37231 505 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 EIF2S3P41091 472 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 DPP6P42658 865 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 WASP42768 502 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SLC1A2P43004 574 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 GLRBP48167 497 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SLC5A3P53794 718 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 POU4F1Q01851 419 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SEMG2Q02383 582 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CFHR1Q03591 330 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PEX6Q13608 980 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 GAB4Q2WGN9 574 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 LSM12Q3MHD2 195 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 ARL13AQ5H913 290 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 SH2D4BQ5SQS7 431 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ESRP1Q6NXG1 681 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 MSANTD2Q6P1R3 559 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PCSK4Q6UW60 755 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 KDELC1Q6UW63 502 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 BNC2Q6ZN30 1099 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 KIAA0408Q6ZU52 694 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 TMPRSS7Q7RTY8 843 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SCD5Q86SK9 330 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 C12orf40Q86WS4 652 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PDSS2Q86YH6 399 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 HPS6Q86YV9 775 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SPATA2LQ8IUW3 424 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 DENND6AQ8IWF6 608 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 RGL4Q8IZJ4 473 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 LSMEM2Q8N112 164 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 FSTL5Q8N475 847 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 RTL3Q8N8U3 475 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 FAM181AQ8N9Y4 354 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 KYQ8NBH2 561 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 RP9Q8TA86 221 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 SLC26A7Q8TE54 656 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SH3RF2Q8TEC5 729 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 PYDC1Q8WXC3 89 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 MRPS31Q92665 395 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 FATE1Q969F0 183 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CCDC124Q96CT7 223 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 IFT43Q96FT9 208 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 ELMO2Q96JJ3 720 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 FAR2Q96K12 515 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 FCRL2Q96LA5 508 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 MRGPRX2Q96LB1 330 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 GPR78Q96P69 363 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 LENG8Q96PV6 779 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 TRAPPC9Q96Q05 1148 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 RANBP9Q96S59 729 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SERPINI1Q99574 410 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 KLHL4Q9C0H6 718 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 YIPF3Q9GZM5 350 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SIK2Q9H0K1 926 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SLC25A51Q9H1U9 297 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 SLC6A17Q9H1V8 727 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 LINC00597Q9H2U6 94 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 MRPL46Q9H2W6 279 aaKnown RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 WDR55Q9H6Y2 383 aaPredicted RBP6.08□□□□□ -1.44
NEK8-208ENST00000593261 TREX1Q9NSU2 369 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 RBM22Q9NW64 420 aaKnown RBP eCLIP6.08□□□□□ -1.44
NEK8-208ENST00000593261 CLIC5Q9NZA1 410 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 BCAP29Q9UHQ4 241 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 VPS28Q9UK41 221 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 CYP8B1Q9UNU6 501 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 BTBD3Q9Y2F9 522 aa6.08□□□□□ -1.44
NEK8-208ENST00000593261 FNDC3AQ9Y2H6 1198 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms