RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CNOT6Q9ULM6 557 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-217ENST00000592741 INSL5Q9Y5Q6 135 aa16.4■□□□□ 0.22
PRKCSH-217ENST00000592741 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 IQCF5A8MTL0 148 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 C9JVG2 144 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 H0YJX3 145 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 GPR39O43194 453 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 S100BP04271 92 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ALPIP09923 528 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 HSD17B1P14061 328 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 SPATS1Q496A3 300 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PTRHD1Q6GMV3 140 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ADAMTSL2Q86TH1 951 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 WFDC5Q8TCV5 224 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PIH1D2Q8WWB5 315 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ESAMQ96AP7 390 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 LRRC58Q96CX6 371 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ALG14Q96F25 216 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 CNBD2Q96M20 576 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 C2orf49Q9BVC5 232 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 TM6SF2Q9BZW4 377 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 CLPBQ9H078 707 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 SEMA6AQ9H2E6 1030 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 SNX13Q9Y5W8 968 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 CPQQ9Y646 472 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ENO4A6NNW6 628 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 FXYD1O00168 92 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 GFRA2O00451 464 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 KIF3CO14782 793 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 GREM1O60565 184 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 OR4F21O95013 312 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PRAMEF12O95522 483 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF7P17097 686 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ATP6V1B2P21281 511 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 GRIA3P42263 894 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ERVK-8P63133 956 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PDCD4Q53EL6 469 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 C6orf52Q5T4I8 152 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ITIH5Q86UX2 942 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC15A3Q8IY34 581 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PAF1Q8N7H5 531 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 ADAMTS19Q8TE59 1207 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 EID2BQ96D98 161 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PLEKHG4BQ96PX9 1271 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 TRIM54Q9BYV2 358 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 PIDD1Q9HB75 910 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 LSM7Q9UK45 103 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 TNPO3Q9Y5L0 923 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-217ENST00000592741 A0A1W2PP18 115 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 AQP12BA6NM10 295 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 K7ERQ8 282 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CSPG5O95196 566 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 PRAMEF1O95521 474 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF26P17031 533 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 RPS3P23396 243 aaKnown RBP eCLIP16.38■□□□□ 0.213e-8■■□□□ 13
PRKCSH-217ENST00000592741 CDKL1Q00532 357 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 BCL2L1Q07817 233 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 NFYCQ13952 458 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 RCAN2Q14206 197 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CAPRIN1Q14444 709 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CNKSR3Q6P9H4 555 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 SCIMPQ6UWF3 145 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 FAM151BQ6UXP7 276 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 SERPINA9Q86WD7 417 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CAMK1DQ8IU85 385 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 AQP12AQ8IXF9 295 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 AHI1Q8N157 1196 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CDYL2Q8N8U2 506 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 BHMTQ93088 406 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 DEFB118Q96PH6 123 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 BRINP2Q9C0B6 783 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC52A3Q9NQ40 469 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 CMTM6Q9NX76 183 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 GMPR2Q9P2T1 348 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 GNPTGQ9UJJ9 305 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 ASB1Q9Y576 335 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 COL4A6Q14031 1691 aa16.38■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC22A3O75751 556 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 OLFM2O95897 454 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC6A2P23975 617 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 MAPK8P45983 427 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 INPP5AQ14642 412 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 PCBP2Q15366 365 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■■■ 31.4
PRKCSH-217ENST00000592741 TXNDC8Q6A555 127 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ANKRD33Q7Z3H0 272 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 FAM217AQ8IXS0 508 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 APCDD1Q8J025 514 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 RBFAQ8N0V3 343 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 TTC16Q8NEE8 873 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 OR6K2Q8NGY2 324 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF296Q8WUU4 475 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 PPWD1Q96BP3 646 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ACOX2Q99424 681 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 COQ10BQ9H8M1 238 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ZFYVE1Q9HBF4 777 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms