RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MYRIPQ8NFW9 859 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 FBF1Q8TES7 1133 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 OR1E3Q8WZA6 343 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ZNF514Q96K75 400 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 BOCQ9BWV1 1114 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 CLPBQ9H078 707 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ERVMER34-1Q9H9K5 563 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 CYP4F12Q9HCS2 524 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 FBXO5Q9UKT4 447 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 SUFUQ9UMX1 484 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 MUC6Q6W4X9 2439 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 QSOX1O00391 747 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 PRMT5O14744 637 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 GRID2O43424 1007 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 NUAK1O60285 661 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 AP2A2O94973 939 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 CER1O95813 267 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 CSF2P04141 144 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 ZNF806P0C7X5 589 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 JUNDP17535 347 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 GNPDA1P46926 289 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 ARRB1P49407 418 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 HK3P52790 923 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 HNRNPKP61978 463 aaKnown RBP eCLIP13.45□□□□□ -0.26
VMP1-210ENST00000589823 IRX4P78413 519 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 B4GALNT1Q00973 533 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 BNC1Q01954 994 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 ZNF542PQ5EBM4 170 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 TMEM220Q6QAJ8 160 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 LRRTM4Q86VH4 590 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 LRRC6Q86X45 466 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 CTAGE3PQ8IX95 158 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 PHACTR4Q8IZ21 702 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 PNPLA1Q8N8W4 532 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 RASGEF1AQ8N9B8 481 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 C2CD4AQ8NCU7 369 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 SCARF2Q96GP6 870 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 ELF4Q99607 663 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 GTPBP2Q9BX10 602 aaKnown RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 TXLNGYQ9BZA5 131 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 MRPL40Q9NQ50 206 aaKnown RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 FSCN3Q9NQT6 498 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
VMP1-210ENST00000589823 ZNHIT2Q9UHR6 403 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 GPSM3Q9Y4H4 160 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
VMP1-210ENST00000589823 MYO15AQ9UKN7 3530 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 FAM159BA6NKW6 160 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 OR2AG2A6NM03 316 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CHUKO15111 745 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 KMOO15229 486 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 RIPK2O43353 540 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 OR1I1O60431 355 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 DNAJC6O75061 913 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 ERLIN1O75477 346 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 S1PR4O95977 384 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 ABHD2P08910 425 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 OR56A5P0C7T3 313 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CTSEP14091 401 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 NME1P15531 152 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 ENGP17813 658 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 LEPRP48357 1165 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 MPP1Q00013 466 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 NAB1Q13506 487 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 HLA-BQ31612 363 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 BCL7AQ4VC05 210 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 PYCR3Q53H96 274 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 TCEAL6Q6IPX3 200 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CRTC3Q6UUV7 619 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 SLC26A11Q86WA9 606 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 PPM1NQ8N819 430 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 AENQ8WTP8 325 aaKnown RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
VMP1-210ENST00000589823 TCEAL3Q969E4 200 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 SGF29Q96ES7 293 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 OR2M4Q96R27 311 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CYTH2Q99418 400 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 TSSK1BQ9BXA7 367 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 CCDC68Q9H2F9 335 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 GAREM1Q9H706 876 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 SEMA4GQ9NTN9 838 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 SLC17A6Q9P2U8 582 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 RAPGEFL1Q9UHV5 662 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 GNPTGQ9UJJ9 305 aa13.44□□□□□ -0.26
VMP1-210ENST00000589823 GPR34Q9UPC5 381 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms