RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CERS6Q6ZMG9 384 aa6□□□□□ -1.45
VPS25-204ENST00000589577 FAM183BPQ6ZVS7 135 aa6□□□□□ -1.45
VPS25-204ENST00000589577 DPPA4Q7L190 304 aa6□□□□□ -1.45
VPS25-204ENST00000589577 PRSS42Q7Z5A4 293 aa6□□□□□ -1.45
VPS25-204ENST00000589577 TRIM74Q86UV6 250 aa6□□□□□ -1.45
VPS25-204ENST00000589577 CAMK1DQ8IU85 385 aa6□□□□□ -1.45
VPS25-204ENST00000589577 CCDC170Q8IYT3 715 aa6□□□□□ -1.45
VPS25-204ENST00000589577 ZADH2Q8N4Q0 377 aa6□□□□□ -1.45
VPS25-204ENST00000589577 WDTC1Q8N5D0 677 aa6□□□□□ -1.45
VPS25-204ENST00000589577 CHTF18Q8WVB6 975 aa6□□□□□ -1.45
VPS25-204ENST00000589577 NT5C3BQ969T7 300 aa6□□□□□ -1.45
VPS25-204ENST00000589577 NUS1Q96E22 293 aa6□□□□□ -1.45
VPS25-204ENST00000589577 NSMCE3Q96MG7 304 aa6□□□□□ -1.45
VPS25-204ENST00000589577 FOXC2Q99958 501 aa6□□□□□ -1.45
VPS25-204ENST00000589577 SPOCK3Q9BQ16 436 aa6□□□□□ -1.45
VPS25-204ENST00000589577 WDR77Q9BQA1 342 aaPredicted RBP6□□□□□ -1.45
VPS25-204ENST00000589577 ENKD1Q9H0I2 346 aa6□□□□□ -1.45
VPS25-204ENST00000589577 EPB41L1Q9H4G0 881 aa6□□□□□ -1.45
VPS25-204ENST00000589577 SUV39H2Q9H5I1 410 aa6□□□□□ -1.45
VPS25-204ENST00000589577 NOL6Q9H6R4 1146 aaKnown RBP6□□□□□ -1.45
VPS25-204ENST00000589577 WDCPQ9H6R7 721 aa6□□□□□ -1.45
VPS25-204ENST00000589577 ACP6Q9NPH0 428 aa6□□□□□ -1.45
VPS25-204ENST00000589577 PHPT1Q9NRX4 125 aaPredicted RBP6□□□□□ -1.45
VPS25-204ENST00000589577 DNAI1Q9UI46 699 aa6□□□□□ -1.45
VPS25-204ENST00000589577 SNX7Q9UNH6 387 aa6□□□□□ -1.45
VPS25-204ENST00000589577 TMEM98Q9Y2Y6 226 aa6□□□□□ -1.45
VPS25-204ENST00000589577 ANKRD12Q6UB98 2062 aa6□□□□□ -1.45
VPS25-204ENST00000589577 IGHV5-51A0A0C4DH38 117 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CCL21O00585 134 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 EPHB6O15197 1021 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 KDELR3O43731 214 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 RASSF9O75901 435 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ERBB2P04626 1255 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ALPPP05187 535 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CALB1P05937 261 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 FOSL1P15407 271 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TYRP1P17643 537 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ETFBP38117 255 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CA7P43166 264 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 RGRP47804 291 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 PPP2R2AP63151 447 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 UBE2IP63279 158 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 CSNK1G2P78368 415 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CDR2Q01850 454 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 APBA1Q02410 837 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 RAD51Q06609 339 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TBX2Q13207 712 aaPredicted RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 ACOX1Q15067 660 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CYTH1Q15438 398 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CNGA3Q16281 694 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TAF3Q5VWG9 929 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TRNP1Q6NT89 227 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 XKRXQ6PP77 449 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MARK2Q7KZI7 788 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 SLC26A9Q7LBE3 791 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 BNIPLQ7Z465 357 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MRGPREQ86SM8 312 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 KIAA1328Q86T90 577 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 GALNT16Q8N428 558 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 EPS8L1Q8TE68 723 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 PPP4R1Q8TF05 950 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ZNF606Q8WXB4 792 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CTNNBL1Q8WYA6 563 aaPredicted RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 RSC1A1Q92681 617 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MR1Q95460 341 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ECHDC3Q96DC8 303 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MTFMTQ96DP5 389 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 PGAP3Q96FM1 320 aaPredicted RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 SGSM3Q96HU1 749 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 SLC41A2Q96JW4 573 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 ZNF641Q96N77 438 aaPredicted RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 FCRL4Q96PJ5 515 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TBCBQ99426 244 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 AGPAT1Q99943 283 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 NCAPGQ9BPX3 1015 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 NLNQ9BYT8 704 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MAGEB5Q9BZ81 275 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 HAUS4Q9H6D7 363 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 PPARGC1AQ9UBK2 798 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 CPNE7Q9UBL6 633 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 TNFRSF10DQ9UBN6 386 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 SUCOQ9UBS9 1254 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 PCDHGC3Q9UN70 934 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 CNTN6Q9UQ52 1028 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 PRKAB1Q9Y478 270 aa5.99□□□□□ -1.45
VPS25-204ENST00000589577 INTS1Q8N201 2190 aaKnown RBP5.99□□□□□ -1.45
VPS25-204ENST00000589577 TRGV8A0A0C4DH27 118 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 CCDC78A2IDD5 438 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 FAM72CH0Y354 149 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 ZSCAN12O43309 604 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 BUB1O43683 1085 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 DNAJC6O75061 913 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 CPNE3O75131 537 aaKnown RBP5.98□□□□□ -1.45
VPS25-204ENST00000589577 UBXN7O94888 489 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 RAB40ALP0C0E4 278 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 CCDC175P0C221 793 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 EBLN1P0CF75 366 aa5.98□□□□□ -1.45
VPS25-204ENST00000589577 PNMA6AP0CW24 399 aaPredicted RBP5.98□□□□□ -1.45
VPS25-204ENST00000589577 MYBL1P10243 752 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms