RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 VPS9D1Q9Y2B5 631 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 DNMT3AQ9Y6K1 912 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-220ENST00000588917 CSNK1G3Q9Y6M4 447 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 KLHL33A6NCF5 533 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 QSOX1O00391 747 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 CDX4O14627 284 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-220ENST00000588917 CHUKO15111 745 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 KMOO15229 486 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 GRID2O43424 1007 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 PCDHGA12O60330 932 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 KCNJ13O60928 360 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 ATP1B2P14415 290 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-220ENST00000588917 NSG1P42857 185 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 CARSP49589 748 aaKnown RBP19.34■□□□□ 0.69
CIRBP-220ENST00000588917 LRP8Q14114 963 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 ZNF542PQ5EBM4 170 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 PSAPL1Q6NUJ1 521 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 CCDC25Q86WR0 208 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 ANKMY2Q8IV38 441 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.34■□□□□ 0.694e-6■■■■□ 24.2
CIRBP-220ENST00000588917 FMO2Q99518 471 aa19.34■□□□□ 0.69
CIRBP-220ENST00000588917 MRPL40Q9NQ50 206 aaKnown RBP19.34■□□□□ 0.69
CIRBP-220ENST00000588917 CHD8Q9HCK8 2581 aa19.33■□□□□ 0.69
CIRBP-220ENST00000588917 IGLV3-16A0A075B6K0 115 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 OR51F1A6NGY5 319 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 DNAJC6O75061 913 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 NDUFS3O75489 264 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 BANF1O75531 89 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 PIAS2O75928 621 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 AP2A2O94973 939 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF7P17097 686 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF8P17098 575 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 OGNP20774 298 aaKnown RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 EPHA8P29322 1005 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 MAGEA4P43358 317 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 GNPDA1P46926 289 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 INAVAQ3KP66 663 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 PYCR3Q53H96 274 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 PRRT3Q5FWE3 981 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 HP1BP3Q5SSJ5 553 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 RNF187Q5TA31 235 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 STEAP4Q687X5 459 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 CYS1Q717R9 158 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 MARK2Q7KZI7 788 aaKnown RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 LRRTM4Q86VH4 590 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 IGDCC3Q8IVU1 814 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 PIANPQ8IYJ0 282 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 RBFAQ8N0V3 343 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 OTUD6BQ8N6M0 293 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 LRRN4CLQ8ND94 238 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 CFAP36Q96G28 342 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 FAM167BQ9BTA0 163 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 ARFGAP3Q9NP61 516 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 KLF15Q9UIH9 416 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 GPSM3Q9Y4H4 160 aa19.33■□□□□ 0.68
CIRBP-220ENST00000588917 CNOT1A5YKK6 2376 aaKnown RBP19.33■□□□□ 0.68
CIRBP-220ENST00000588917 RALGAPA1Q6GYQ0 2036 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GON4LQ3T8J9 2241 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 TM4SF5O14894 197 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GPR39O43194 453 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 AQP9O43315 295 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 MTX2O75431 263 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 SPAG6O75602 509 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 FUCA1P04066 466 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GSTM1P09488 218 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 VCLP18206 1134 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 KCNA4P22459 653 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 DGKAP23743 735 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 MCM3P25205 808 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 ARNTP27540 789 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 CDKN1CP49918 316 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GSTM4Q03013 218 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 ILF3Q12906 894 aaKnown RBP eCLIP19.32■□□□□ 0.68
CIRBP-220ENST00000588917 BNIP3Q12983 259 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 SLMAPQ14BN4 828 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 DBN1Q16643 649 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 STPG1Q5TH74 334 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 LVRNQ6Q4G3 990 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 PACS1Q6VY07 963 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 UNC5AQ6ZN44 842 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 DBX2Q6ZNG2 339 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 KCNMB4Q86W47 210 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 LRRC6Q86X45 466 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GKN2Q86XP6 184 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 RELL1Q8IUW5 271 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 RASGEF1AQ8N9B8 481 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GSDMBQ8TAX9 411 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 SAP25Q8TEE9 199 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 PDXPQ96GD0 296 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 OR2M4Q96R27 311 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 GSDMCQ9BYG8 508 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 IL21RQ9HBE5 538 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 RXFP3Q9NSD7 469 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 DOLKQ9UPQ8 538 aa19.32■□□□□ 0.68
CIRBP-220ENST00000588917 C4orf47A7E2U8 309 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 TPP1O14773 563 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 SCAMP1O15126 338 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 ALPPL2P10696 532 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 SHBQ15464 509 aa19.31■□□□□ 0.68
CIRBP-220ENST00000588917 ZNF648Q5T619 568 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms