RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 GNGT1P63211 74 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 B4GALNT1Q00973 533 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 SGCGQ13326 291 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 ADAMTSL4Q6UY14 1074 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 KCTD4Q8WVF5 259 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 PAIP2Q9BPZ3 127 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 IER2Q9BTL4 223 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 BTBD1Q9H0C5 482 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 MLXIPLQ9NP71 852 aa30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 ZFR2Q9UPR6 939 aaKnown RBP30.68■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3DA0A087WVF3 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3IA0A087WXS9 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3EA0A087X179 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3KA0A087X1G2 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 CCDC189A1A4V9 331 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3FA6NER0 549 aaPredicted RBP30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3LB9A6J9 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 BIRC5O15392 142 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 PROCP04070 461 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3HP0C7X1 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 CCDC166P0CW27 439 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3GQ6DHY5 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3CQ6IPX1 549 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 PIM3Q86V86 326 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TAX1BP1Q86VP1 789 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TBC1D3Q8IZP1 549 aaPredicted RBP30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 ARMC2Q8NEN0 867 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 TSTD1Q8NFU3 115 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 PJA1Q8NG27 643 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 RDH11Q8TC12 318 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 MAGEB18Q96M61 343 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 CHRDQ9H2X0 955 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 EPHX3Q9H6B9 360 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 EMCNQ9ULC0 261 aa30.67■■■□□ 2.5
CAPNS1-206ENST00000588815 PLXND1Q9Y4D7 1925 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 LRRC72A6NJI9 287 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 MAGEC1O60732 1142 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 TOP3BO95985 862 aaKnown RBP30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 LSP1P33241 339 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 SERPINB4P48594 390 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 CLCN7P51798 805 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 PPARDQ03181 441 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 GAS6Q14393 721 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 ACAP2Q15057 778 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 SEL1L3Q68CR1 1132 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 PNCKQ6P2M8 343 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 CLDN19Q8N6F1 224 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 OR2T34Q8NGX1 318 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 CD200R1Q8TD46 325 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 NXNL1Q96CM4 212 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 GPR78Q96P69 363 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 SLC17A9Q9BYT1 436 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 SPATS2LQ9NUQ6 558 aaKnown RBP30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 PRSS21Q9Y6M0 314 aa30.66■■■□□ 2.5
CAPNS1-206ENST00000588815 A0A1W2PQU0 124 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 RRP9O43818 475 aaKnown RBP30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 RBP1P09455 135 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 CSHL1Q14406 222 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 PDK4Q16654 411 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 TMEM207Q6UWW9 146 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 TRIM69Q86WT6 500 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 TRIM42Q8IWZ5 723 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 PGBD3Q8N328 593 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 SPEM1Q8N4L4 309 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 FLCNQ8NFG4 579 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 INPP5DQ92835 1189 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 MRPL57Q9BQC6 102 aaKnown RBP30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 C12orf65Q9H3J6 166 aaKnown RBP30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 IGSF5Q9NSI5 407 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 ZNF358Q9NW07 568 aa30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 CNOT6Q9ULM6 557 aaKnown RBP30.65■■■□□ 2.5
CAPNS1-206ENST00000588815 KPNA5O15131 536 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 OXTRP30559 389 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 PGGT1BP53609 377 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 ATP6V0D1P61421 351 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 DLG1Q12959 904 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 WSCD2Q2TBF2 565 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 LRRC8EQ6NSJ5 796 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 PAQR3Q6TCH7 311 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 CCDC63Q8NA47 563 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 CCDC97Q96F63 343 aaPredicted RBP30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 DERL2Q9GZP9 239 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 MUTYHQ9UIF7 546 aa30.64■■■□□ 2.5
CAPNS1-206ENST00000588815 TMEM115Q12893 351 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 TTLL9Q3SXZ7 439 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 TTC19Q6DKK2 380 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 C16orf46Q6P387 395 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 RGS9BPQ6ZS82 235 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 FSTL5Q8N475 847 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 ANKRD49Q8WVL7 239 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 PDLIM5Q96HC4 596 aaKnown RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 HIC2Q96JB3 615 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 ZNF514Q96K75 400 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 MRPL46Q9H2W6 279 aaKnown RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 TRIM39Q9HCM9 518 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 EIF3FO00303 357 aaPredicted RBP30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 VEGFDO43915 354 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 ZNF217O75362 1048 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 FTH1P02794 183 aa30.63■■■□□ 2.49
CAPNS1-206ENST00000588815 MAGEA9P43362 315 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms